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The map label for this gene is yggW [H]

Identifier: 116689018

GI number: 116689018

Start: 1102029

End: 1103243

Strand: Reverse

Name: yggW [H]

Synonym: Bcen2424_0995

Alternate gene names: 116689018

Gene position: 1103243-1102029 (Counterclockwise)

Preceding gene: 116689019

Following gene: 116689017

Centisome position: 31.67

GC content: 66.34

Gene sequence:

>1215_bases
ATGAGCCAGGCCGCGGACACCGGCGCGCGCGTCGTCGCGACCTTCACGTCGCCCGGCCAGGTGCGTCTCACGTCGCTGCC
GCCGCTCGCGCTGTACGTGCATTTCCCGTGGTGCGTGCGCAAGTGCCCGTACTGCGATTTCAACTCGCACGAATGGAAAG
GCGAACGGTTCCCGGAAGCCGACTATCTCGACGCGTTGCGCGCCGACCTCGAGCAGGCGCTGCCGCTCGTGTGGGGCCGA
CAAGTGCATACCGTGTTCATCGGCGGCGGCACGCCGAGCCTGCTGTCGGCGGCCGGCCTCGACCGGATGCTGTCCGACGT
GCGCGCGCTCTTGCCGCTCGACGCCGATGCCGAGATCACGCTAGAAGCGAATCCGGGCACGTTCGAAGCCGCGAAGTTCG
CGCAGTTCCGCGCCAGCGGCGTGAACCGCCTGTCGGTCGGCATCCAGAGCTTCAACGAAGCGCACCTGAAGGCGCTCGGC
CGGATTCACGACACCGCGCAGGCGCGCGCGGCCGTCGAGATCGCCGCGAAGAACTTCGACAACTTCAACCTCGACCTGAT
GTTCGCATTGCCGAACCAGACGCTGGACGAATGCCGCACCGACATCGAGACCGCGCTGTCGTTCGCGCCGCCGCACCTGT
CGCTGTATCACCTGACGCTCGAGCCGAATACGCTGTTCGCGAAGTTCCCGCCCGTCGTTCCCGACGACGACGCGTCGGCC
GACATGCAGGAATGGATCCATGCGCGCACGGCCGAAGCCGGCTACGGGCGCTATGAAGTGTCCGCATACGCGAAGCCGAA
TCATCAGTGCAAGCACAACCTGAATTACTGGCGCTTCGGCGACTATCTCGGGATCGGCGCGGGCGCCCATACGAAGCTGT
CGTTCCCGAACCGGATCCTGCGGCAGGCGCGCTACAAGCATCCGGCGACCTTCATCGAGCAGGCGAAGGCCGGCACGGCC
GTGCAGGAAGAGCGTGAAGTCGGCGCGCGCGACCTGCCGTTCGAATTCATGCTGAACACGCTGCGGCTCGTCGAGGGCTT
CCCCGTGCACAGCTTCGCGGAACGCACGGGCCTGCCGATGAGCACGATCGAGCCGGCGCTGAAGGAAGCGGAACGGCGCG
GGCTGATCACGCGCGATTTCACGCAGATCGCGCCGACACCGCTCGGCCAGCGTTTCCTCAACGACCTGCAGGAATTGTTC
CTGCGCGACGACTGA

Upstream 100 bases:

>100_bases
AACACGCACAGCCATCGCGCGCTGGCGCTGAAGGCGTTGCTCGCGCGGCTCGCGGAGGAAGCATGAGTTTGCTCGATACC
CATTCGCTGCAGGAGGTCGC

Downstream 100 bases:

>100_bases
ACGCATGAACGACGCGGCATTTCGGTTACAATGCCGCCTCGTGTGGAAGCGTGGCCGAGCGGTTTAAGGCACTGGTCTTG
AAAACCAGCGACGGGAAACT

Product: coproporphyrinogen III oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MSQAADTGARVVATFTSPGQVRLTSLPPLALYVHFPWCVRKCPYCDFNSHEWKGERFPEADYLDALRADLEQALPLVWGR
QVHTVFIGGGTPSLLSAAGLDRMLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVGIQSFNEAHLKALG
RIHDTAQARAAVEIAAKNFDNFNLDLMFALPNQTLDECRTDIETALSFAPPHLSLYHLTLEPNTLFAKFPPVVPDDDASA
DMQEWIHARTAEAGYGRYEVSAYAKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAKAGTA
VQEEREVGARDLPFEFMLNTLRLVEGFPVHSFAERTGLPMSTIEPALKEAERRGLITRDFTQIAPTPLGQRFLNDLQELF
LRDD

Sequences:

>Translated_404_residues
MSQAADTGARVVATFTSPGQVRLTSLPPLALYVHFPWCVRKCPYCDFNSHEWKGERFPEADYLDALRADLEQALPLVWGR
QVHTVFIGGGTPSLLSAAGLDRMLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVGIQSFNEAHLKALG
RIHDTAQARAAVEIAAKNFDNFNLDLMFALPNQTLDECRTDIETALSFAPPHLSLYHLTLEPNTLFAKFPPVVPDDDASA
DMQEWIHARTAEAGYGRYEVSAYAKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAKAGTA
VQEEREVGARDLPFEFMLNTLRLVEGFPVHSFAERTGLPMSTIEPALKEAERRGLITRDFTQIAPTPLGQRFLNDLQELF
LRDD
>Mature_403_residues
SQAADTGARVVATFTSPGQVRLTSLPPLALYVHFPWCVRKCPYCDFNSHEWKGERFPEADYLDALRADLEQALPLVWGRQ
VHTVFIGGGTPSLLSAAGLDRMLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSVGIQSFNEAHLKALGR
IHDTAQARAAVEIAAKNFDNFNLDLMFALPNQTLDECRTDIETALSFAPPHLSLYHLTLEPNTLFAKFPPVVPDDDASAD
MQEWIHARTAEAGYGRYEVSAYAKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAKAGTAV
QEEREVGARDLPFEFMLNTLRLVEGFPVHSFAERTGLPMSTIEPALKEAERRGLITRDFTQIAPTPLGQRFLNDLQELFL
RDD

Specific function: Unknown

COG id: COG0635

COG function: function code H; Coproporphyrinogen III oxidase and related Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anaerobic coproporphyrinogen-III oxidase family [H]

Homologues:

Organism=Homo sapiens, GI8922911, Length=269, Percent_Identity=39.0334572490706, Blast_Score=177, Evalue=2e-44,
Organism=Escherichia coli, GI1789325, Length=383, Percent_Identity=53.0026109660574, Blast_Score=399, Evalue=1e-112,
Organism=Escherichia coli, GI87082341, Length=248, Percent_Identity=31.0483870967742, Blast_Score=119, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR004559
- InterPro:   IPR010723
- InterPro:   IPR007197 [H]

Pfam domain/function: PF06969 HemN_C; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 45053; Mature: 44922

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQAADTGARVVATFTSPGQVRLTSLPPLALYVHFPWCVRKCPYCDFNSHEWKGERFPEA
CCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCH
DYLDALRADLEQALPLVWGRQVHTVFIGGGTPSLLSAAGLDRMLSDVRALLPLDADAEIT
HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
LEANPGTFEAAKFAQFRASGVNRLSVGIQSFNEAHLKALGRIHDTAQARAAVEIAAKNFD
EECCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NFNLDLMFALPNQTLDECRTDIETALSFAPPHLSLYHLTLEPNTLFAKFPPVVPDDDASA
CCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCH
DMQEWIHARTAEAGYGRYEVSAYAKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRIL
HHHHHHHHHCCCCCCCEEEEEEECCCCCHHHCCCCEEEECCEEECCCCCCCCCCCHHHHH
RQARYKHPATFIEQAKAGTAVQEEREVGARDLPFEFMLNTLRLVEGFPVHSFAERTGLPM
HHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCH
STIEPALKEAERRGLITRDFTQIAPTPLGQRFLNDLQELFLRDD
HHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQAADTGARVVATFTSPGQVRLTSLPPLALYVHFPWCVRKCPYCDFNSHEWKGERFPEA
CCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCH
DYLDALRADLEQALPLVWGRQVHTVFIGGGTPSLLSAAGLDRMLSDVRALLPLDADAEIT
HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
LEANPGTFEAAKFAQFRASGVNRLSVGIQSFNEAHLKALGRIHDTAQARAAVEIAAKNFD
EECCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NFNLDLMFALPNQTLDECRTDIETALSFAPPHLSLYHLTLEPNTLFAKFPPVVPDDDASA
CCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCH
DMQEWIHARTAEAGYGRYEVSAYAKPNHQCKHNLNYWRFGDYLGIGAGAHTKLSFPNRIL
HHHHHHHHHCCCCCCCEEEEEEECCCCCHHHCCCCEEEECCEEECCCCCCCCCCCHHHHH
RQARYKHPATFIEQAKAGTAVQEEREVGARDLPFEFMLNTLRLVEGFPVHSFAERTGLPM
HHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCH
STIEPALKEAERRGLITRDFTQIAPTPLGQRFLNDLQELFLRDD
HHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]