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The map label for this gene is yggV [C]

Identifier: 116689019

GI number: 116689019

Start: 1103278

End: 1103904

Strand: Reverse

Name: yggV [C]

Synonym: Bcen2424_0996

Alternate gene names: 116689019

Gene position: 1103904-1103278 (Counterclockwise)

Preceding gene: 116689020

Following gene: 116689018

Centisome position: 31.69

GC content: 70.18

Gene sequence:

>627_bases
ATGCCTGACGACCGCACCGTCGCGCCGCTGTCGCGCATCGTTCTCGCGTCGAACAACCCGGGCAAGCTGCGCGAATTCAC
CGCGCTGTTCTCGACGGTCGGCATCGAGATCGTCCCGCAGGGCGAGCTCGCGGTGCCCGAGGCGGAAGAGCCGTTCGGCA
CGTTCATCGAGAACGCGCTGACCAAGGCACGCCACGCGTCGCGGCTCACCGGGCTGCCGGCGATCGCCGACGATTCCGGC
CTGTGCGTGCGCGTGCTGCGCGGCGCGCCGGGCGTCTATTCGGCACGCTACGCGCAGCGCGCGGGCCGCGACAAGGGCGA
CGCAGCGAACAACGCGTATCTCGTCGAGCAACTGCGCGGCATCGACGACCGGCGCGCGTACTACTGCTGCGTGCTCGCGC
TCGTCCGCCATGCGGACGATCCGGAGCCGCTGTTCGCCGAAGGGCGCTGGGCCGGCGAGATCGTCGATACGCCACGCGGC
GAACACGGTTTCGGCTACGACCCGTATTTCTACCTGCCGTCGCTCGGCGCGACGGCGGCCGAACTCGAGCCGGCCGTGAA
GAACACGCACAGCCATCGCGCGCTGGCGCTGAAGGCGTTGCTCGCGCGGCTCGCGGAGGAAGCATGA

Upstream 100 bases:

>100_bases
GTGCCGTTCTCGCGCGCCGAGATGAACGCGCTGCTCGACCTCGCGCAGGGCGGAATCGCCGAGCTGGTGCAGTTGCAGAA
GGATGTCCTGGGTGCGAGCC

Downstream 100 bases:

>100_bases
GTTTGCTCGATACCCATTCGCTGCAGGAGGTCGCATGAGCCAGGCCGCGGACACCGGCGCGCGCGTCGTCGCGACCTTCA
CGTCGCCCGGCCAGGTGCGT

Product: putative deoxyribonucleotide triphosphate pyrophosphatase

Products: NA

Alternate protein names: Nucleoside triphosphate phosphohydrolase; NTPase [H]

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MPDDRTVAPLSRIVLASNNPGKLREFTALFSTVGIEIVPQGELAVPEAEEPFGTFIENALTKARHASRLTGLPAIADDSG
LCVRVLRGAPGVYSARYAQRAGRDKGDAANNAYLVEQLRGIDDRRAYYCCVLALVRHADDPEPLFAEGRWAGEIVDTPRG
EHGFGYDPYFYLPSLGATAAELEPAVKNTHSHRALALKALLARLAEEA

Sequences:

>Translated_208_residues
MPDDRTVAPLSRIVLASNNPGKLREFTALFSTVGIEIVPQGELAVPEAEEPFGTFIENALTKARHASRLTGLPAIADDSG
LCVRVLRGAPGVYSARYAQRAGRDKGDAANNAYLVEQLRGIDDRRAYYCCVLALVRHADDPEPLFAEGRWAGEIVDTPRG
EHGFGYDPYFYLPSLGATAAELEPAVKNTHSHRALALKALLARLAEEA
>Mature_207_residues
PDDRTVAPLSRIVLASNNPGKLREFTALFSTVGIEIVPQGELAVPEAEEPFGTFIENALTKARHASRLTGLPAIADDSGL
CVRVLRGAPGVYSARYAQRAGRDKGDAANNAYLVEQLRGIDDRRAYYCCVLALVRHADDPEPLFAEGRWAGEIVDTPRGE
HGFGYDPYFYLPSLGATAAELEPAVKNTHSHRALALKALLARLAEEA

Specific function: Hydrolyzes non-standard nucleotides such as XTP and dITP/ITP. Might exclude non-standard purines from DNA precursor pool, preventing thus incorporation into DNA and avoiding chromosomal lesions [H]

COG id: COG0127

COG function: function code F; Xanthosine triphosphate pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAM1 NTPase family [H]

Homologues:

Organism=Homo sapiens, GI15626999, Length=191, Percent_Identity=30.8900523560209, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI31657144, Length=145, Percent_Identity=34.4827586206897, Blast_Score=66, Evalue=2e-11,
Organism=Escherichia coli, GI1789324, Length=197, Percent_Identity=52.2842639593909, Blast_Score=194, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI17556833, Length=197, Percent_Identity=31.9796954314721, Blast_Score=74, Evalue=4e-14,
Organism=Drosophila melanogaster, GI19920712, Length=188, Percent_Identity=30.3191489361702, Blast_Score=76, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002637
- InterPro:   IPR020922 [H]

Pfam domain/function: PF01725 Ham1p_like [H]

EC number: =3.6.1.15 [H]

Molecular weight: Translated: 22529; Mature: 22397

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDDRTVAPLSRIVLASNNPGKLREFTALFSTVGIEIVPQGELAVPEAEEPFGTFIENAL
CCCCCHHHHHHHEEEECCCCCHHHHHHHHHHHHCEEEEECCCCCCCCCCCHHHHHHHHHH
TKARHASRLTGLPAIADDSGLCVRVLRGAPGVYSARYAQRAGRDKGDAANNAYLVEQLRG
HHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHC
IDDRRAYYCCVLALVRHADDPEPLFAEGRWAGEIVDTPRGEHGFGYDPYFYLPSLGATAA
CCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHH
ELEPAVKNTHSHRALALKALLARLAEEA
HHCHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PDDRTVAPLSRIVLASNNPGKLREFTALFSTVGIEIVPQGELAVPEAEEPFGTFIENAL
CCCCHHHHHHHEEEECCCCCHHHHHHHHHHHHCEEEEECCCCCCCCCCCHHHHHHHHHH
TKARHASRLTGLPAIADDSGLCVRVLRGAPGVYSARYAQRAGRDKGDAANNAYLVEQLRG
HHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHC
IDDRRAYYCCVLALVRHADDPEPLFAEGRWAGEIVDTPRGEHGFGYDPYFYLPSLGATAA
CCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHH
ELEPAVKNTHSHRALALKALLARLAEEA
HHCHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA