| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688986
Identifier: 116688986
GI number: 116688986
Start: 1069225
End: 1069746
Strand: Reverse
Name: 116688986
Synonym: Bcen2424_0963
Alternate gene names: NA
Gene position: 1069746-1069225 (Counterclockwise)
Preceding gene: 116688988
Following gene: 116688985
Centisome position: 30.71
GC content: 54.21
Gene sequence:
>522_bases ATGGAACAACAGGCAAAACACTGGATGCTTGTCAGTGACGTCATTCGCAAGGACGCTCCTTATTTCGGCGCGATCGGCAT CGTATTTGCCATCGTTCAACTGGTCGGCTTCCGGCTTGGTATGCATGATCTGGGCACTGATCTCATGATGGAACAGATCG TGTTTAAAGGTGTCTTGCTGGGCTTAATGTTCATATGGTTGCTCCGCTTCCCGGTGGAGTTGATGAAGCTGAAACGCAAT CGTTCATTTCCATGGCTCGAGAGGCTGATCGACCGAGCCGCACAACGAACTGTGTCTGCCGCAGTCGCAGCTGCGATGGT AATAGGCGGCACCGCCATCGTCGCGGCCTTTGACCGCGACTATCGTGCCGCAAGTCTGTTCGTCTACGCATTCGTTTATT TCATCGCTATAGCGGAAGCAGCCGCCAACCCTCTGCTGGAAACTTCTCGGCAGTCGCGAATGCAATCCGCTGCCATGGGC GTCCTCATTGGCCTTCCGTTTGGTGTCTCCCTTGTCGCGTAA
Upstream 100 bases:
>100_bases CGTTCAGGCCCATGATTGTACGCGCAACTTTCAGGCACTATGGCGAGTGCCGCTACGGGCCTATCATCGATATTGACCTT CATTGCGCCGGAGAAACATC
Downstream 100 bases:
>100_bases GCGCTCTTCCGACTCGGATCTACTTGCACTCCCCAAACCAAATCTCCACCGAATCACGTAATGACCGCTTTCCTGCTGAT CTGGAGCCCCAAGAAATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MEQQAKHWMLVSDVIRKDAPYFGAIGIVFAIVQLVGFRLGMHDLGTDLMMEQIVFKGVLLGLMFIWLLRFPVELMKLKRN RSFPWLERLIDRAAQRTVSAAVAAAMVIGGTAIVAAFDRDYRAASLFVYAFVYFIAIAEAAANPLLETSRQSRMQSAAMG VLIGLPFGVSLVA
Sequences:
>Translated_173_residues MEQQAKHWMLVSDVIRKDAPYFGAIGIVFAIVQLVGFRLGMHDLGTDLMMEQIVFKGVLLGLMFIWLLRFPVELMKLKRN RSFPWLERLIDRAAQRTVSAAVAAAMVIGGTAIVAAFDRDYRAASLFVYAFVYFIAIAEAAANPLLETSRQSRMQSAAMG VLIGLPFGVSLVA >Mature_173_residues MEQQAKHWMLVSDVIRKDAPYFGAIGIVFAIVQLVGFRLGMHDLGTDLMMEQIVFKGVLLGLMFIWLLRFPVELMKLKRN RSFPWLERLIDRAAQRTVSAAVAAAMVIGGTAIVAAFDRDYRAASLFVYAFVYFIAIAEAAANPLLETSRQSRMQSAAMG VLIGLPFGVSLVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19157; Mature: 19157
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQQAKHWMLVSDVIRKDAPYFGAIGIVFAIVQLVGFRLGMHDLGTDLMMEQIVFKGVLL CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH GLMFIWLLRFPVELMKLKRNRSFPWLERLIDRAAQRTVSAAVAAAMVIGGTAIVAAFDRD HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC YRAASLFVYAFVYFIAIAEAAANPLLETSRQSRMQSAAMGVLIGLPFGVSLVA HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC >Mature Secondary Structure MEQQAKHWMLVSDVIRKDAPYFGAIGIVFAIVQLVGFRLGMHDLGTDLMMEQIVFKGVLL CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH GLMFIWLLRFPVELMKLKRNRSFPWLERLIDRAAQRTVSAAVAAAMVIGGTAIVAAFDRD HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC YRAASLFVYAFVYFIAIAEAAANPLLETSRQSRMQSAAMGVLIGLPFGVSLVA HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA