Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116688985

Identifier: 116688985

GI number: 116688985

Start: 1068712

End: 1069164

Strand: Reverse

Name: 116688985

Synonym: Bcen2424_0962

Alternate gene names: NA

Gene position: 1069164-1068712 (Counterclockwise)

Preceding gene: 116688986

Following gene: 116688984

Centisome position: 30.69

GC content: 68.43

Gene sequence:

>453_bases
ATGACCGCTTTCCTGCTGATCTGGAGCCCCAAGAAATGGCCATGGCCCGAGTTGCCCGACGTCGCCGCGCGCGTGAAGGC
CGGCGAGGCCGTGCATGACGTCTGGGGCTGCGGCTTCGCGCGCGGCATCCTGCCCGGCGACCGCGTGTTCCTGCACCGCG
TCGCGAAGGAGCCCAAGGGCGTGTTCGGCTCCGGCTACGTGACGCGCGCGCCATACGAGGTACCCGATCCGTCGACCAGG
CGCGGCTACCGGCTGTGCATCGACTTCGTGTACGACTGGCTGGTCGACGCGCACCAGGACGTCGTGATTCCGCGCGACGC
GCTGCGCGTCCATCCGTATTCGGTACAGACCTGGGATGCGCAGAGTTCCGGCACGTCGATCAAGCCGATGGTCGAAGGTC
CGCTCGAAAAGCGCTGGGCCGAGCTGACCGGCAGGCGCAAGCCGCCGCGGTAG

Upstream 100 bases:

>100_bases
CCTCATTGGCCTTCCGTTTGGTGTCTCCCTTGTCGCGTAAGCGCTCTTCCGACTCGGATCTACTTGCACTCCCCAAACCA
AATCTCCACCGAATCACGTA

Downstream 100 bases:

>100_bases
GCGGAAACCGGGTCGAATCGGGGCCGCCTTTCTGTCCGGCCGATTCCCCCGGCGCGCCGAAAGGCCGCGGACCGGCCGGC
GGGCTTGCCGCGCGCGTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MTAFLLIWSPKKWPWPELPDVAARVKAGEAVHDVWGCGFARGILPGDRVFLHRVAKEPKGVFGSGYVTRAPYEVPDPSTR
RGYRLCIDFVYDWLVDAHQDVVIPRDALRVHPYSVQTWDAQSSGTSIKPMVEGPLEKRWAELTGRRKPPR

Sequences:

>Translated_150_residues
MTAFLLIWSPKKWPWPELPDVAARVKAGEAVHDVWGCGFARGILPGDRVFLHRVAKEPKGVFGSGYVTRAPYEVPDPSTR
RGYRLCIDFVYDWLVDAHQDVVIPRDALRVHPYSVQTWDAQSSGTSIKPMVEGPLEKRWAELTGRRKPPR
>Mature_149_residues
TAFLLIWSPKKWPWPELPDVAARVKAGEAVHDVWGCGFARGILPGDRVFLHRVAKEPKGVFGSGYVTRAPYEVPDPSTRR
GYRLCIDFVYDWLVDAHQDVVIPRDALRVHPYSVQTWDAQSSGTSIKPMVEGPLEKRWAELTGRRKPPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17036; Mature: 16905

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFLLIWSPKKWPWPELPDVAARVKAGEAVHDVWGCGFARGILPGDRVFLHRVAKEPKG
CEEEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHCHHHHCCCCCHHHHHHHHHCCCCC
VFGSGYVTRAPYEVPDPSTRRGYRLCIDFVYDWLVDAHQDVVIPRDALRVHPYSVQTWDA
CCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHEEECCCEEEECCC
QSSGTSIKPMVEGPLEKRWAELTGRRKPPR
CCCCCCCCHHHCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TAFLLIWSPKKWPWPELPDVAARVKAGEAVHDVWGCGFARGILPGDRVFLHRVAKEPKG
EEEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHCHHHHCCCCCHHHHHHHHHCCCCC
VFGSGYVTRAPYEVPDPSTRRGYRLCIDFVYDWLVDAHQDVVIPRDALRVHPYSVQTWDA
CCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHEEECCCEEEECCC
QSSGTSIKPMVEGPLEKRWAELTGRRKPPR
CCCCCCCCHHHCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA