| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688962
Identifier: 116688962
GI number: 116688962
Start: 1047792
End: 1048334
Strand: Reverse
Name: 116688962
Synonym: Bcen2424_0939
Alternate gene names: NA
Gene position: 1048334-1047792 (Counterclockwise)
Preceding gene: 116688963
Following gene: 116688958
Centisome position: 30.09
GC content: 69.8
Gene sequence:
>543_bases ATGAACGCGTCCGCACGTTACGCAGCGCTGTTCGGCGTGTTCGCGCCGCTGTCGATCGCGACGATCGGCGGTGGGCAGGC GGTCATCGCGGATATCCAGCGGCAGGTCGTCGACGTCCATCACTGGATGAGCGCCACGCAATTCGTGAACGACTTCGCGA TCGCGCGGATGGCGCCGGGTCCCGGCTCGCTGCTGGCGACGCTGATCGGCTGGCAGGTGGCCGGTTTCTGGGGCGCGGTG ATCGCGACGCTCGCGCTGTTCGGCCCGACCGCGTTCCTGATCTATGGTGTCGCGCATCTATGGCGGCGACACCGGGGCGC ACGCTGGCAAATCGCGCTCGAAGCCGGCCTGCGCCCGGTCGCGGCCGGCATGATCCTCGCGTCGGTGTGGGTGCTGCTGC AGGCGCTCGACGGCGGCTGGGCCGCCCGCGCGATCGCGGCTGCGTCGACGCTGTGCGTGATCTACACGCGCGTTCATGCG CTGCTGCTGATCGCGATCGGCGCGCTGCTGCTCGTGGGTGTGCACACGCTCGGCGGGGTGTAA
Upstream 100 bases:
>100_bases TGCACTGGCCGCTCGTATGGACCGTGCTGATCGGCGGCGCGCTGAGCGTCGCGCTCGAATACCGCCGTGCGGCCGCCGCG CCGGCCGGGAGCGACGCACG
Downstream 100 bases:
>100_bases CGCGCCGCCGCCATCATCGCACCGGCCGTCGCGTGATCGTCTAGGCCCCACGAAACACCGGCGCACGCCGCTCCGCGAAC GCGCGCAACCCTTCGTCGAA
Product: chromate transporter
Products: NA
Alternate protein names: Transmembrane Protein; Chromate Transporter Chromate Ion Transporter Family; ChrA Half Sized-Like Protein; Chromate Efflux Pump; Hromate Transport Membrane Protein; Subunit Of Chromate Transporter; Chromate Transporter Family; Chromate Transporter ChrA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MNASARYAALFGVFAPLSIATIGGGQAVIADIQRQVVDVHHWMSATQFVNDFAIARMAPGPGSLLATLIGWQVAGFWGAV IATLALFGPTAFLIYGVAHLWRRHRGARWQIALEAGLRPVAAGMILASVWVLLQALDGGWAARAIAAASTLCVIYTRVHA LLLIAIGALLLVGVHTLGGV
Sequences:
>Translated_180_residues MNASARYAALFGVFAPLSIATIGGGQAVIADIQRQVVDVHHWMSATQFVNDFAIARMAPGPGSLLATLIGWQVAGFWGAV IATLALFGPTAFLIYGVAHLWRRHRGARWQIALEAGLRPVAAGMILASVWVLLQALDGGWAARAIAAASTLCVIYTRVHA LLLIAIGALLLVGVHTLGGV >Mature_180_residues MNASARYAALFGVFAPLSIATIGGGQAVIADIQRQVVDVHHWMSATQFVNDFAIARMAPGPGSLLATLIGWQVAGFWGAV IATLALFGPTAFLIYGVAHLWRRHRGARWQIALEAGLRPVAAGMILASVWVLLQALDGGWAARAIAAASTLCVIYTRVHA LLLIAIGALLLVGVHTLGGV
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18887; Mature: 18887
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASARYAALFGVFAPLSIATIGGGQAVIADIQRQVVDVHHWMSATQFVNDFAIARMAPG CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PGSLLATLIGWQVAGFWGAVIATLALFGPTAFLIYGVAHLWRRHRGARWQIALEAGLRPV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCHHH AAGMILASVWVLLQALDGGWAARAIAAASTLCVIYTRVHALLLIAIGALLLVGVHTLGGV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNASARYAALFGVFAPLSIATIGGGQAVIADIQRQVVDVHHWMSATQFVNDFAIARMAPG CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PGSLLATLIGWQVAGFWGAVIATLALFGPTAFLIYGVAHLWRRHRGARWQIALEAGLRPV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCHHH AAGMILASVWVLLQALDGGWAARAIAAASTLCVIYTRVHALLLIAIGALLLVGVHTLGGV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA