| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688963
Identifier: 116688963
GI number: 116688963
Start: 1048331
End: 1048942
Strand: Reverse
Name: 116688963
Synonym: Bcen2424_0940
Alternate gene names: NA
Gene position: 1048942-1048331 (Counterclockwise)
Preceding gene: 116688964
Following gene: 116688962
Centisome position: 30.11
GC content: 71.9
Gene sequence:
>612_bases ATGCCCCCGCCCTCCACCACGACGCCTCAGGTACCGCCCGCCGGCGACGCTCCGCCGCCCGGCGTCCTCGCGCTGTTCAT CGCGTTCGCGCAGATCGGCCTGACCAGCTTCGGCGGCGGGCTCAGCGGGCGGATGATGCGCGACTTCGTCCACGAGCGGC GCTGGCTCGACGAAGAGGCTTTCCTCAACGGCCTCGCGCTGTCGCAGGCGTTGCCGGGCGTCAACGTGAAGAACCTCGCG ATCTGGATCGGCTACCGGCTCGCCGGATGGCGCGGCGCGGTGGCCGGCTTCACCGGCATCATCGCGCCGCCGGCCGTGCT GATCGTGCTGTTCGGCATCGCGTTCTCTACCCTCACGCGCTTTCCGCTCACGCATGTCGCACTCGCCGGTGCGGCGGCCG CGGCGATCGGGCTGTCGATCTCGATGGCGATCACCGCGGTGCGCCGGCTACCGCGCCGCGCGCTGCCGTTCGCGGTGATG ACACTCACCTTCGTGTCCGTCGCGGTGCTGCACTGGCCGCTCGTATGGACCGTGCTGATCGGCGGCGCGCTGAGCGTCGC GCTCGAATACCGCCGTGCGGCCGCCGCGCCGGCCGGGAGCGACGCACGATGA
Upstream 100 bases:
>100_bases TGCGGGCGGCACCGCGCCCGTGCCGAATCCATGTCAGCGTGCTGACAGGCACCGCTTGCTAACATGGGCGATCGCCCGAT CGCCACGTGCTACCCGCCCG
Downstream 100 bases:
>100_bases ACGCGTCCGCACGTTACGCAGCGCTGTTCGGCGTGTTCGCGCCGCTGTCGATCGCGACGATCGGCGGTGGGCAGGCGGTC ATCGCGGATATCCAGCGGCA
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MPPPSTTTPQVPPAGDAPPPGVLALFIAFAQIGLTSFGGGLSGRMMRDFVHERRWLDEEAFLNGLALSQALPGVNVKNLA IWIGYRLAGWRGAVAGFTGIIAPPAVLIVLFGIAFSTLTRFPLTHVALAGAAAAAIGLSISMAITAVRRLPRRALPFAVM TLTFVSVAVLHWPLVWTVLIGGALSVALEYRRAAAAPAGSDAR
Sequences:
>Translated_203_residues MPPPSTTTPQVPPAGDAPPPGVLALFIAFAQIGLTSFGGGLSGRMMRDFVHERRWLDEEAFLNGLALSQALPGVNVKNLA IWIGYRLAGWRGAVAGFTGIIAPPAVLIVLFGIAFSTLTRFPLTHVALAGAAAAAIGLSISMAITAVRRLPRRALPFAVM TLTFVSVAVLHWPLVWTVLIGGALSVALEYRRAAAAPAGSDAR >Mature_202_residues PPPSTTTPQVPPAGDAPPPGVLALFIAFAQIGLTSFGGGLSGRMMRDFVHERRWLDEEAFLNGLALSQALPGVNVKNLAI WIGYRLAGWRGAVAGFTGIIAPPAVLIVLFGIAFSTLTRFPLTHVALAGAAAAAIGLSISMAITAVRRLPRRALPFAVMT LTFVSVAVLHWPLVWTVLIGGALSVALEYRRAAAAPAGSDAR
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 21216; Mature: 21085
Theoretical pI: Translated: 11.95; Mature: 11.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPPSTTTPQVPPAGDAPPPGVLALFIAFAQIGLTSFGGGLSGRMMRDFVHERRWLDEEA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHH FLNGLALSQALPGVNVKNLAIWIGYRLAGWRGAVAGFTGIIAPPAVLIVLFGIAFSTLTR HHHHHHHHHHCCCCCHHHEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FPLTHVALAGAAAAAIGLSISMAITAVRRLPRRALPFAVMTLTFVSVAVLHWPLVWTVLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGALSVALEYRRAAAAPAGSDAR HHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PPPSTTTPQVPPAGDAPPPGVLALFIAFAQIGLTSFGGGLSGRMMRDFVHERRWLDEEA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHH FLNGLALSQALPGVNVKNLAIWIGYRLAGWRGAVAGFTGIIAPPAVLIVLFGIAFSTLTR HHHHHHHHHHCCCCCHHHEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FPLTHVALAGAAAAAIGLSISMAITAVRRLPRRALPFAVMTLTFVSVAVLHWPLVWTVLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGALSVALEYRRAAAAPAGSDAR HHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]