| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688947
Identifier: 116688947
GI number: 116688947
Start: 1031520
End: 1031846
Strand: Direct
Name: 116688947
Synonym: Bcen2424_0924
Alternate gene names: NA
Gene position: 1031520-1031846 (Clockwise)
Preceding gene: 116688946
Following gene: 116688948
Centisome position: 29.61
GC content: 59.94
Gene sequence:
>327_bases ATGGAGCGGGACCGGGTTTGCGTTCTTCGGAACCTACCTGCATCCGATCCGCGCTGGTACAAATACGTCTGGCAGATATG GACGCCCGATTCGCCGCTCGAAAGCGCGGAGTTCTTCGAGCATGGTCCGCGCTACTGCACGGCGCAATTCCATGAGACGG AGAAACGACTGTCCGAGGCAGGCGTGTCGGGGTTCATCTACAACCGACAGTTACCGCGGCGCGGGCTCGGCAAACCGTTC GATCTGACGCATCCCCGATGGGCAAACCGGGAATGGGCACCAGCATGGGAAGATGATCCCGATCCCGAGTGGAACGGTCA CAAGTAA
Upstream 100 bases:
>100_bases TATGCCCGGCGCCTCCGCGAGTTGATTTCTGGCAACATTCGCGGCCCCGAGCGGGACGGCGACCGATAATGCTTCGACCG ACGAAGGAAGATTTTCAACG
Downstream 100 bases:
>100_bases TCGGGTGCCGGCTTCCGAGATTCGCGGCCTCGAAAATCCCGGTTTTGTACGCCTTTAATAAGATATGGAAAGTGTCCTAT TTCCGGTCACGCCAAGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MERDRVCVLRNLPASDPRWYKYVWQIWTPDSPLESAEFFEHGPRYCTAQFHETEKRLSEAGVSGFIYNRQLPRRGLGKPF DLTHPRWANREWAPAWEDDPDPEWNGHK
Sequences:
>Translated_108_residues MERDRVCVLRNLPASDPRWYKYVWQIWTPDSPLESAEFFEHGPRYCTAQFHETEKRLSEAGVSGFIYNRQLPRRGLGKPF DLTHPRWANREWAPAWEDDPDPEWNGHK >Mature_108_residues MERDRVCVLRNLPASDPRWYKYVWQIWTPDSPLESAEFFEHGPRYCTAQFHETEKRLSEAGVSGFIYNRQLPRRGLGKPF DLTHPRWANREWAPAWEDDPDPEWNGHK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12927; Mature: 12927
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERDRVCVLRNLPASDPRWYKYVWQIWTPDSPLESAEFFEHGPRYCTAQFHETEKRLSEA CCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCHHHHHHCCCCEEEHHHHHHHHHHHHC GVSGFIYNRQLPRRGLGKPFDLTHPRWANREWAPAWEDDPDPEWNGHK CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MERDRVCVLRNLPASDPRWYKYVWQIWTPDSPLESAEFFEHGPRYCTAQFHETEKRLSEA CCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCHHHHHHCCCCEEEHHHHHHHHHHHHC GVSGFIYNRQLPRRGLGKPFDLTHPRWANREWAPAWEDDPDPEWNGHK CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA