Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688948

Identifier: 116688948

GI number: 116688948

Start: 1032069

End: 1032926

Strand: Direct

Name: 116688948

Synonym: Bcen2424_0925

Alternate gene names: NA

Gene position: 1032069-1032926 (Clockwise)

Preceding gene: 116688947

Following gene: 116688952

Centisome position: 29.62

GC content: 52.21

Gene sequence:

>858_bases
ATGTCTGATGACCCTAGGCTCCTAATGGAGCTTGACCGGACCACTGAGACCGAAGTCGCCAACCGCGCAAAGCGAAGAAT
ACGGCGTGCGCCACCACCTGACGTTGATGACGTGTCGAAATCAATTCACTTCCTACGCGGAGTTGGTTCCCGAGCATCGT
TTGTATTGACCAGCTTCTATTTTCTTCTGGCTACCGAAATCGATGGCAAGAGGCCGTGTACCGTTCCCGGCTACCCAGGG
GAAGTCCTTCAGAGTTATCTACAATTCGTGTCGCTCAATAATCTCGCCCTTACATGCCGCAAGGTATTCGATCACGGGGC
GAAAGGTCTCACCGGCGCACAGTTCGGAAAGCAACGGGACGAAACCCTCAAGGGGCATGCTGAATATTGGGCGAAGAGCT
CGCAACGCCCCATCGAGGATGCATGTTCGGCGCTTCATTTCCTGCGCACCTTTTTCGCCAAGTGCTCGAAAACCGATGCC
GCTCTGTTCAGAGAAGGAACAACGCTCGGTCGAAGGATCGGGTTTATCAAACAATATGCCGATCACGCTGCCGCCCATCT
TTCATTGGATGACTATGAGTTCAACCATCTTGATTTGGCGCACGTTGTTGCAGCACTAGTACTTGTAGGTGAGATCATTC
GTAGCTTCGATGCGCCTTACCAACCAACTGACTACTATGATCAAATCGATCAAGCGTCGTTGGATGCTTCGGTTGCCTTG
TTCCCCGACACCCCTCAGCTCAGGCTCTTCCAAAATATGAAGGTCGGGTCGCAAGCTAGTATGTGCTGGCAAGTGGGGGA
GGCATCCGGGATTCAAATGATGACAGAGCAACTTCCTTACACGATTGGTTGGTTCTGA

Upstream 100 bases:

>100_bases
TGTGAGTCGGGATTTTCGGCGGATTTAATATCGGACCGGACACGTCATCGGTTATATTCAGGAGTTGCATCGTGCTTGAC
GCGATCCACCGGAGATTGGT

Downstream 100 bases:

>100_bases
GTCGGCCCCGTAGGGCCCGCCCGACATTCAAGCAGATTCGAGCAGCGAATCGATGATCTTGACCGCTTTCCGGCTCGCAT
CGTTCGGGCTCAGATGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSDDPRLLMELDRTTETEVANRAKRRIRRAPPPDVDDVSKSIHFLRGVGSRASFVLTSFYFLLATEIDGKRPCTVPGYPG
EVLQSYLQFVSLNNLALTCRKVFDHGAKGLTGAQFGKQRDETLKGHAEYWAKSSQRPIEDACSALHFLRTFFAKCSKTDA
ALFREGTTLGRRIGFIKQYADHAAAHLSLDDYEFNHLDLAHVVAALVLVGEIIRSFDAPYQPTDYYDQIDQASLDASVAL
FPDTPQLRLFQNMKVGSQASMCWQVGEASGIQMMTEQLPYTIGWF

Sequences:

>Translated_285_residues
MSDDPRLLMELDRTTETEVANRAKRRIRRAPPPDVDDVSKSIHFLRGVGSRASFVLTSFYFLLATEIDGKRPCTVPGYPG
EVLQSYLQFVSLNNLALTCRKVFDHGAKGLTGAQFGKQRDETLKGHAEYWAKSSQRPIEDACSALHFLRTFFAKCSKTDA
ALFREGTTLGRRIGFIKQYADHAAAHLSLDDYEFNHLDLAHVVAALVLVGEIIRSFDAPYQPTDYYDQIDQASLDASVAL
FPDTPQLRLFQNMKVGSQASMCWQVGEASGIQMMTEQLPYTIGWF
>Mature_284_residues
SDDPRLLMELDRTTETEVANRAKRRIRRAPPPDVDDVSKSIHFLRGVGSRASFVLTSFYFLLATEIDGKRPCTVPGYPGE
VLQSYLQFVSLNNLALTCRKVFDHGAKGLTGAQFGKQRDETLKGHAEYWAKSSQRPIEDACSALHFLRTFFAKCSKTDAA
LFREGTTLGRRIGFIKQYADHAAAHLSLDDYEFNHLDLAHVVAALVLVGEIIRSFDAPYQPTDYYDQIDQASLDASVALF
PDTPQLRLFQNMKVGSQASMCWQVGEASGIQMMTEQLPYTIGWF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31970; Mature: 31838

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDPRLLMELDRTTETEVANRAKRRIRRAPPPDVDDVSKSIHFLRGVGSRASFVLTSFY
CCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
FLLATEIDGKRPCTVPGYPGEVLQSYLQFVSLNNLALTCRKVFDHGAKGLTGAQFGKQRD
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHCCHHH
ETLKGHAEYWAKSSQRPIEDACSALHFLRTFFAKCSKTDAALFREGTTLGRRIGFIKQYA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHH
DHAAAHLSLDDYEFNHLDLAHVVAALVLVGEIIRSFDAPYQPTDYYDQIDQASLDASVAL
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEE
FPDTPQLRLFQNMKVGSQASMCWQVGEASGIQMMTEQLPYTIGWF
CCCCCHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SDDPRLLMELDRTTETEVANRAKRRIRRAPPPDVDDVSKSIHFLRGVGSRASFVLTSFY
CCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
FLLATEIDGKRPCTVPGYPGEVLQSYLQFVSLNNLALTCRKVFDHGAKGLTGAQFGKQRD
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHCCHHH
ETLKGHAEYWAKSSQRPIEDACSALHFLRTFFAKCSKTDAALFREGTTLGRRIGFIKQYA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHH
DHAAAHLSLDDYEFNHLDLAHVVAALVLVGEIIRSFDAPYQPTDYYDQIDQASLDASVAL
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEE
FPDTPQLRLFQNMKVGSQASMCWQVGEASGIQMMTEQLPYTIGWF
CCCCCHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA