| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688942
Identifier: 116688942
GI number: 116688942
Start: 1027520
End: 1027801
Strand: Direct
Name: 116688942
Synonym: Bcen2424_0919
Alternate gene names: NA
Gene position: 1027520-1027801 (Clockwise)
Preceding gene: 116688940
Following gene: 116688945
Centisome position: 29.49
GC content: 57.45
Gene sequence:
>282_bases TTGGATTGGGCTTGCCCGGTTAGTCAGCGCGCTGGTTATCCGGGCCGACCCATCTTGGCCCACCAGTTAGGTCAGATCCT TATCGGACGCGGTGACCTCGCAGCGGAAACCTGCAGCGTCGAGTTCATCGGCCAAGTCCTTCAGGGCACGGTTTGCTGCA TCCTGATCGTGATTTGCATCATGCGGGAGAACGTTGACAGTTCGCAGCACGTTGGGCGCGATCTCATGCAAGTGAATCTC GACAGAGCCTTTCCGCAAAACCTGAGTGCGGCCGTCAATTAG
Upstream 100 bases:
>100_bases CAGGGGTTTGGGTGGGGATGGCAAGCGGGTGGTTTCGGGCGGTGGCAGCGAAACTGGCATGGCTGCTTGATGGAGCGGTG GCGTCGCTGGCAATGGATGA
Downstream 100 bases:
>100_bases ATGTCTGGTTGGATCAAGAAGCGAAAGCTTCCAGGTCGGCAGGGTCGTACTGATCTGGCTCAACAGGTTTTCGTTGGCCT CTCCATAAATCAGGACGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MDWACPVSQRAGYPGRPILAHQLGQILIGRGDLAAETCSVEFIGQVLQGTVCCILIVICIMRENVDSSQHVGRDLMQVNL DRAFPQNLSAAVN
Sequences:
>Translated_93_residues MDWACPVSQRAGYPGRPILAHQLGQILIGRGDLAAETCSVEFIGQVLQGTVCCILIVICIMRENVDSSQHVGRDLMQVNL DRAFPQNLSAAVN >Mature_93_residues MDWACPVSQRAGYPGRPILAHQLGQILIGRGDLAAETCSVEFIGQVLQGTVCCILIVICIMRENVDSSQHVGRDLMQVNL DRAFPQNLSAAVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10094; Mature: 10094
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWACPVSQRAGYPGRPILAHQLGQILIGRGDLAAETCSVEFIGQVLQGTVCCILIVICI CCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MRENVDSSQHVGRDLMQVNLDRAFPQNLSAAVN HHCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure MDWACPVSQRAGYPGRPILAHQLGQILIGRGDLAAETCSVEFIGQVLQGTVCCILIVICI CCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MRENVDSSQHVGRDLMQVNLDRAFPQNLSAAVN HHCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA