| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688945
Identifier: 116688945
GI number: 116688945
Start: 1030605
End: 1031084
Strand: Direct
Name: 116688945
Synonym: Bcen2424_0922
Alternate gene names: NA
Gene position: 1030605-1031084 (Clockwise)
Preceding gene: 116688942
Following gene: 116688946
Centisome position: 29.58
GC content: 58.13
Gene sequence:
>480_bases ATGACCACAAACAATTCGCTTTCTCGGTTTCACGCCTTCATGGCAGCCTATGACGGTTGCCGTGCTTCGGCACTCGCAAG TGCGTTGCAGCTAACGCCGATGGCCGCGCGAGCACTCGGCCTGATCAATACATTTCCCGGCATGACCCTGCACGAGTTGA GTTGCATTCTCGGCGGCAGTCAGGCACAAGTGATTGGGGCGGCGTTCGACCTTAAGCACTTCGGCTACATCGACATGACC GATGAGCAAAACGACAATCGGCGGTGCGTGCTCCGGCCCATCCGAGACAAGATGTTCGGCTTCGACGGGTATCAACGGCT TGTGAACAATCTGGCGACGGACGCCGGAATCGCCGATCGTCTGACGGCGTTGCTGCCGCTGTATCAGGACGTGTTGATGA AAGCCTTGGAAGAACTGCAGGGCGACGCGCAGAGCGTCCAATATCAGGCGCAACGGCGGATACTGGCGCGGGTTGTCTAA
Upstream 100 bases:
>100_bases TTGTCGAGATGTTGACGTATCGTGCAGTGGATGCCTGAGCGGTCGGGGATGACAACGAACGCCGTTAGGCAAGCGATCAA TCCAGAAAAATCAACGAACT
Downstream 100 bases:
>100_bases TCAACGCCGACGGCCTTTGACCTCGACGCGATAAACGCCGGTCTAGGTTCGCTATGGAATTTGAGAAGGTGTTCGCAGGG AGGTCATGGCCGGAAGTACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MTTNNSLSRFHAFMAAYDGCRASALASALQLTPMAARALGLINTFPGMTLHELSCILGGSQAQVIGAAFDLKHFGYIDMT DEQNDNRRCVLRPIRDKMFGFDGYQRLVNNLATDAGIADRLTALLPLYQDVLMKALEELQGDAQSVQYQAQRRILARVV
Sequences:
>Translated_159_residues MTTNNSLSRFHAFMAAYDGCRASALASALQLTPMAARALGLINTFPGMTLHELSCILGGSQAQVIGAAFDLKHFGYIDMT DEQNDNRRCVLRPIRDKMFGFDGYQRLVNNLATDAGIADRLTALLPLYQDVLMKALEELQGDAQSVQYQAQRRILARVV >Mature_158_residues TTNNSLSRFHAFMAAYDGCRASALASALQLTPMAARALGLINTFPGMTLHELSCILGGSQAQVIGAAFDLKHFGYIDMTD EQNDNRRCVLRPIRDKMFGFDGYQRLVNNLATDAGIADRLTALLPLYQDVLMKALEELQGDAQSVQYQAQRRILARVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17542; Mature: 17411
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNNSLSRFHAFMAAYDGCRASALASALQLTPMAARALGLINTFPGMTLHELSCILGGS CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC QAQVIGAAFDLKHFGYIDMTDEQNDNRRCVLRPIRDKMFGFDGYQRLVNNLATDAGIADR HHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHH LTALLPLYQDVLMKALEELQGDAQSVQYQAQRRILARVV HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTNNSLSRFHAFMAAYDGCRASALASALQLTPMAARALGLINTFPGMTLHELSCILGGS CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC QAQVIGAAFDLKHFGYIDMTDEQNDNRRCVLRPIRDKMFGFDGYQRLVNNLATDAGIADR HHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHH LTALLPLYQDVLMKALEELQGDAQSVQYQAQRRILARVV HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA