| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688918
Identifier: 116688918
GI number: 116688918
Start: 1005378
End: 1006262
Strand: Direct
Name: 116688918
Synonym: Bcen2424_0895
Alternate gene names: NA
Gene position: 1005378-1006262 (Clockwise)
Preceding gene: 116688917
Following gene: 116688919
Centisome position: 28.86
GC content: 66.78
Gene sequence:
>885_bases ATGAGCGAATCCCAGATCATCGAAGTCCCGTCCGCCGACTGGAGCGGACACAACCTGTCGGCGCCGCGCGAGCAGTTGCT CGCCGCGGTCGAGGAAGGCAAGGTGCTGTATTTCCCGCACCTGCGCTTCGCGATCGACGGCGGCGAGGAAGCGCTGCTCG ATCCGGCGCTCGCCGATCCGAAACGCAAGAACATCAGTCTCGCGCCGAACGGTGGCGCGCTTGCCGGCGTGCTCGGCGAC AGCGTCACGCAGTCGGCCGTGCGCGCGCTCGTCGCGCGCTTCCAGCAGCAGGCCGGCACGCTCGTCGATGGCCTTTTCCC CGAATACCGCGGCAAGCTGCGCGTCGCGCCGACGAGCCTGCGGCTGATGCAGGTCGAAACGCGCCAGACGTCGTGGCGCA AGGACGACAGCCGCCTGCACGTCGACGCATTCCCGTCGCGGCCGAACTACGGCGAGCGCATCCTGCGCGTGTTCACGAAC GTGAACCCGGCCGGCGTGCCGCGCGTGTGGCGCGTCGGCGAGCCGTTCGAGGATGTCGCGAAGCGCTTCCTGCCGAAGAT CCGGCCGCAGTTGCCGGGCTCGGCGTGGCTGCTGAACCTCCTGCACGTAACGAAATCGCCGCGCAGCGCGTACGACCATC TGATGCTGAACCTGCACGACGGGATGAAGGCCGATCTCGACTACCAGAAGACGTGTCCCCAGCAGACGATGCCGTTTCCG CCGGGCAGCGTGTGGATATGTTTCTCCGATCAGACTTCTCACGCTGTGATGTCCGGCCAGTTCATGCTGGAGCAGACCTT CTTTCTGCCGGTCGACGCGATGGTGCGCCGCGAATGCGCGCCGCTCGGCATTCTCGAACGCCTGACGGGCAGGGCGCTGG TTTGA
Upstream 100 bases:
>100_bases TCAATCTCGGCACGGCGGGGCAACCCCCGTCGATCGCGCAGGTGAAGTCGGCGCTCGCGGGCTTCGGTCTCCTGTAACGC TGTCCACACGCGAACCGATC
Downstream 100 bases:
>100_bases GCGCGCACCTGCTTCGACGCAACCCCCGGACGGCCGCATGCTGAGGGCGATCTATCGTGCGCTGTGGTGGCTCGTCGCGC CTGCCGCCGTGATCCGGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSESQIIEVPSADWSGHNLSAPREQLLAAVEEGKVLYFPHLRFAIDGGEEALLDPALADPKRKNISLAPNGGALAGVLGD SVTQSAVRALVARFQQQAGTLVDGLFPEYRGKLRVAPTSLRLMQVETRQTSWRKDDSRLHVDAFPSRPNYGERILRVFTN VNPAGVPRVWRVGEPFEDVAKRFLPKIRPQLPGSAWLLNLLHVTKSPRSAYDHLMLNLHDGMKADLDYQKTCPQQTMPFP PGSVWICFSDQTSHAVMSGQFMLEQTFFLPVDAMVRRECAPLGILERLTGRALV
Sequences:
>Translated_294_residues MSESQIIEVPSADWSGHNLSAPREQLLAAVEEGKVLYFPHLRFAIDGGEEALLDPALADPKRKNISLAPNGGALAGVLGD SVTQSAVRALVARFQQQAGTLVDGLFPEYRGKLRVAPTSLRLMQVETRQTSWRKDDSRLHVDAFPSRPNYGERILRVFTN VNPAGVPRVWRVGEPFEDVAKRFLPKIRPQLPGSAWLLNLLHVTKSPRSAYDHLMLNLHDGMKADLDYQKTCPQQTMPFP PGSVWICFSDQTSHAVMSGQFMLEQTFFLPVDAMVRRECAPLGILERLTGRALV >Mature_293_residues SESQIIEVPSADWSGHNLSAPREQLLAAVEEGKVLYFPHLRFAIDGGEEALLDPALADPKRKNISLAPNGGALAGVLGDS VTQSAVRALVARFQQQAGTLVDGLFPEYRGKLRVAPTSLRLMQVETRQTSWRKDDSRLHVDAFPSRPNYGERILRVFTNV NPAGVPRVWRVGEPFEDVAKRFLPKIRPQLPGSAWLLNLLHVTKSPRSAYDHLMLNLHDGMKADLDYQKTCPQQTMPFPP GSVWICFSDQTSHAVMSGQFMLEQTFFLPVDAMVRRECAPLGILERLTGRALV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32721; Mature: 32590
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESQIIEVPSADWSGHNLSAPREQLLAAVEEGKVLYFPHLRFAIDGGEEALLDPALADP CCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCEEEEEECCCHHHCCCCCCCC KRKNISLAPNGGALAGVLGDSVTQSAVRALVARFQQQAGTLVDGLFPEYRGKLRVAPTSL CCCCEEECCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHCHHHHHCCHHHCCCEEECCCCE RLMQVETRQTSWRKDDSRLHVDAFPSRPNYGERILRVFTNVNPAGVPRVWRVGEPFEDVA EEEEEHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCHHHHH KRFLPKIRPQLPGSAWLLNLLHVTKSPRSAYDHLMLNLHDGMKADLDYQKTCPQQTMPFP HHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHEEEECCCCCCCCCCHHHCCCCCCCCCC PGSVWICFSDQTSHAVMSGQFMLEQTFFLPVDAMVRRECAPLGILERLTGRALV CCCEEEEECCCCCCHHHCCCEEEEHHCCCCHHHHHHHHCCCHHHHHHHCCCCCC >Mature Secondary Structure SESQIIEVPSADWSGHNLSAPREQLLAAVEEGKVLYFPHLRFAIDGGEEALLDPALADP CCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCEEEEEECCCHHHCCCCCCCC KRKNISLAPNGGALAGVLGDSVTQSAVRALVARFQQQAGTLVDGLFPEYRGKLRVAPTSL CCCCEEECCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHCHHHHHCCHHHCCCEEECCCCE RLMQVETRQTSWRKDDSRLHVDAFPSRPNYGERILRVFTNVNPAGVPRVWRVGEPFEDVA EEEEEHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCHHHHH KRFLPKIRPQLPGSAWLLNLLHVTKSPRSAYDHLMLNLHDGMKADLDYQKTCPQQTMPFP HHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHEEEECCCCCCCCCCHHHCCCCCCCCCC PGSVWICFSDQTSHAVMSGQFMLEQTFFLPVDAMVRRECAPLGILERLTGRALV CCCEEEEECCCCCCHHHCCCEEEEHHCCCCHHHHHHHHCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA