Click here to switch to the map view.

The map label for this gene is 116688878

Identifier: 116688878

GI number: 116688878

Start: 961029

End: 961811

Strand: Direct

Name: 116688878

Synonym: Bcen2424_0855

Alternate gene names: NA

Gene position: 961029-961811 (Clockwise)

Preceding gene: 116688877

Following gene: 116688879

Centisome position: 27.58

GC content: 71.78

Gene sequence:

>783_bases
ATGATGGACGATCCGCGCAAGCCTTCGAACCAGCAGGACGACGATGCGTCGGCGCAACTGCTGTCCGCGCTGCTGGACGG
CGAACTGTCCGGGCACGAGCGGCGCGAGATGCTCGAGCGCCTGCAGTCCGATCCGCAGGAAGCCGAACGATTCGCCCATT
ACCGTGCTCAGCGCGATGCGCTGAAAGCACTGTTCCCGTTGCCGGCCGCCGCGCCCGCGTTGTTCGTGCAGCGCCGCGCG
CCGCGCTGGCGCGCCGTCGCCCACGCGTTCGCCGGGCTGGCGGCCGGGCTGCTGATCGGTGTCGCGCTGCATGCGGGCTG
GGCGGCGTTCGGCCGCGAACCGGCGTTCGCCGCGCGCGCGGATGTCGCGTACGCCGTGTACGCCGCCGACCGCGAGCATC
CGGTGGAAGTCGGTGCGGCCGATCCCAAGCGTCTCGCCGCGTGGCTGTCGGCGCGGATTGGCCAGCCGGTGCGCGCGCCG
TCGCTCGACGAATACGGTTACGCGCTGCTGGGCGGTCGATTGCTGCCCGGCGACGCGGGGCCGGCCGCGCAGCTCATGTA
CCAGCGCGCGGACGGCGCGCGCGTGACGCTGTACATGACCGCATACGATGCGCGTCGCCTCGCGCCGCGGGCGATGTCGG
CCGACGGTCGATACACGTATTTCTGGTCGGATCGCGGCATGGGTTATGCGCTGTCCGGCCGTGGCGACGAACAGCGTCTG
CGCGAACTCGCGATCGACGCATGCGGCGCGCTGGGCGGGCCGACCGACGCGTGGAAGGGATGA

Upstream 100 bases:

>100_bases
TGATGTCTCGGCTCGCGCGGGCGCGTGCGCAGATGCGCGCGTTGCTGTCGGACGCGCCGTCGTCGCACGGCACGGCCACG
TTACGGGTGATCGGGAAGCC

Downstream 100 bases:

>100_bases
CGTGCGGTGCCCGCAGGGAGCAGGCGATGAAGACGGCGATGATGAAGGGGTTGGTGCTGACGGCGGTCGTCGCGGGCACG
ATGCTTGCACGAGCGCAGGG

Product: putative transmembrane anti-sigma factor

Products: NA

Alternate protein names: Transmembrane Transcriptional Regulator; Transmembrane Regulator; Anti-Sigma Factor; Transmembrane Protein; PrtR Transmembrane Transcriptional Regulator; Transmembrane Transcription Regulator; Transcriptional Regulator; Transmembrane Regulator PrtR

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MMDDPRKPSNQQDDDASAQLLSALLDGELSGHERREMLERLQSDPQEAERFAHYRAQRDALKALFPLPAAAPALFVQRRA
PRWRAVAHAFAGLAAGLLIGVALHAGWAAFGREPAFAARADVAYAVYAADREHPVEVGAADPKRLAAWLSARIGQPVRAP
SLDEYGYALLGGRLLPGDAGPAAQLMYQRADGARVTLYMTAYDARRLAPRAMSADGRYTYFWSDRGMGYALSGRGDEQRL
RELAIDACGALGGPTDAWKG

Sequences:

>Translated_260_residues
MMDDPRKPSNQQDDDASAQLLSALLDGELSGHERREMLERLQSDPQEAERFAHYRAQRDALKALFPLPAAAPALFVQRRA
PRWRAVAHAFAGLAAGLLIGVALHAGWAAFGREPAFAARADVAYAVYAADREHPVEVGAADPKRLAAWLSARIGQPVRAP
SLDEYGYALLGGRLLPGDAGPAAQLMYQRADGARVTLYMTAYDARRLAPRAMSADGRYTYFWSDRGMGYALSGRGDEQRL
RELAIDACGALGGPTDAWKG
>Mature_260_residues
MMDDPRKPSNQQDDDASAQLLSALLDGELSGHERREMLERLQSDPQEAERFAHYRAQRDALKALFPLPAAAPALFVQRRA
PRWRAVAHAFAGLAAGLLIGVALHAGWAAFGREPAFAARADVAYAVYAADREHPVEVGAADPKRLAAWLSARIGQPVRAP
SLDEYGYALLGGRLLPGDAGPAAQLMYQRADGARVTLYMTAYDARRLAPRAMSADGRYTYFWSDRGMGYALSGRGDEQRL
RELAIDACGALGGPTDAWKG

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28221; Mature: 28221

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDDPRKPSNQQDDDASAQLLSALLDGELSGHERREMLERLQSDPQEAERFAHYRAQRDA
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LKALFPLPAAAPALFVQRRAPRWRAVAHAFAGLAAGLLIGVALHAGWAAFGREPAFAARA
HHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
DVAYAVYAADREHPVEVGAADPKRLAAWLSARIGQPVRAPSLDEYGYALLGGRLLPGDAG
HHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCEECCCCCC
PAAQLMYQRADGARVTLYMTAYDARRLAPRAMSADGRYTYFWSDRGMGYALSGRGDEQRL
HHHHHHHHHCCCCEEEEEEEEHHHHHHCCHHHCCCCCEEEEECCCCCCEEECCCCHHHHH
RELAIDACGALGGPTDAWKG
HHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MMDDPRKPSNQQDDDASAQLLSALLDGELSGHERREMLERLQSDPQEAERFAHYRAQRDA
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LKALFPLPAAAPALFVQRRAPRWRAVAHAFAGLAAGLLIGVALHAGWAAFGREPAFAARA
HHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
DVAYAVYAADREHPVEVGAADPKRLAAWLSARIGQPVRAPSLDEYGYALLGGRLLPGDAG
HHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCEECCCCCC
PAAQLMYQRADGARVTLYMTAYDARRLAPRAMSADGRYTYFWSDRGMGYALSGRGDEQRL
HHHHHHHHHCCCCEEEEEEEEHHHHHHCCHHHCCCCCEEEEECCCCCCEEECCCCHHHHH
RELAIDACGALGGPTDAWKG
HHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA