The gene/protein map for NC_008542 is currently unavailable.
Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688876

Identifier: 116688876

GI number: 116688876

Start: 960130

End: 960489

Strand: Direct

Name: 116688876

Synonym: Bcen2424_0853

Alternate gene names: NA

Gene position: 960130-960489 (Clockwise)

Preceding gene: 116688875

Following gene: 116688877

Centisome position: 27.56

GC content: 70.56

Gene sequence:

>360_bases
ATGAAACGGATGCTCTTCGCCGCCGCGCTGACGGCGGCGATCGTGCGGCCGGCGGCCGCGGAACCGCCACAGGTCGCCGA
CGGGAAACTCGTCGACGAAGCACACATGACGCTGTACGTGTTCGATCGCGATGCGCCGGGCAAGAGCATGTGCGACGGCA
CGTGCGCAGCCAACTGGCCGCCCGCGCTCGCCGACGCGTACGACAAGGCGTCGGGGGCGCTGAGCCTCGTCGCCCGCGAC
GACGGCAAAAAGCAGTGGGCGTACCGCGGCCGCCCGCTGTATCGCTGGAAGATGGACCACAAGGCCGGCGACGCGGGCGG
CGACGGAATCGGCGGCATGTGGCACGTCGCACGGCCGTGA

Upstream 100 bases:

>100_bases
CGAGTTCCGGCACCGCCGGCCGGCGGGATAATGATCGCGACGCAGCCGATCGTCCCGTCCGGCGGCATCGTGTCGCGACA
CGACGTCAAGGAGAACGGGA

Downstream 100 bases:

>100_bases
CCGCGCGGCGACGCGCGAGGCATCCCGATGAGCTATGAGTCGGACCTGCTGGTGTGGCTTCCGCATCTCACGCGCTATGC
GCGTGCGCTGACGGGCGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Secreted Repeat-Containing Protein; Signal Peptide Protein; Secreted Repeat Protein; Secreted Protein; Exported Protein

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKRMLFAAALTAAIVRPAAAEPPQVADGKLVDEAHMTLYVFDRDAPGKSMCDGTCAANWPPALADAYDKASGALSLVARD
DGKKQWAYRGRPLYRWKMDHKAGDAGGDGIGGMWHVARP

Sequences:

>Translated_119_residues
MKRMLFAAALTAAIVRPAAAEPPQVADGKLVDEAHMTLYVFDRDAPGKSMCDGTCAANWPPALADAYDKASGALSLVARD
DGKKQWAYRGRPLYRWKMDHKAGDAGGDGIGGMWHVARP
>Mature_119_residues
MKRMLFAAALTAAIVRPAAAEPPQVADGKLVDEAHMTLYVFDRDAPGKSMCDGTCAANWPPALADAYDKASGALSLVARD
DGKKQWAYRGRPLYRWKMDHKAGDAGGDGIGGMWHVARP

Specific function: Unknown

COG id: COG4315

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12787; Mature: 12787

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRMLFAAALTAAIVRPAAAEPPQVADGKLVDEAHMTLYVFDRDAPGKSMCDGTCAANWP
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCEEEEEEECCCCCCCCCCCCCCCCCC
PALADAYDKASGALSLVARDDGKKQWAYRGRPLYRWKMDHKAGDAGGDGIGGMWHVARP
CHHHHHHCCCCCEEEEEEECCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCEEEECCC
>Mature Secondary Structure
MKRMLFAAALTAAIVRPAAAEPPQVADGKLVDEAHMTLYVFDRDAPGKSMCDGTCAANWP
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCEEEEEEECCCCCCCCCCCCCCCCCC
PALADAYDKASGALSLVARDDGKKQWAYRGRPLYRWKMDHKAGDAGGDGIGGMWHVARP
CHHHHHHCCCCCEEEEEEECCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA