| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688876
Identifier: 116688876
GI number: 116688876
Start: 960130
End: 960489
Strand: Direct
Name: 116688876
Synonym: Bcen2424_0853
Alternate gene names: NA
Gene position: 960130-960489 (Clockwise)
Preceding gene: 116688875
Following gene: 116688877
Centisome position: 27.56
GC content: 70.56
Gene sequence:
>360_bases ATGAAACGGATGCTCTTCGCCGCCGCGCTGACGGCGGCGATCGTGCGGCCGGCGGCCGCGGAACCGCCACAGGTCGCCGA CGGGAAACTCGTCGACGAAGCACACATGACGCTGTACGTGTTCGATCGCGATGCGCCGGGCAAGAGCATGTGCGACGGCA CGTGCGCAGCCAACTGGCCGCCCGCGCTCGCCGACGCGTACGACAAGGCGTCGGGGGCGCTGAGCCTCGTCGCCCGCGAC GACGGCAAAAAGCAGTGGGCGTACCGCGGCCGCCCGCTGTATCGCTGGAAGATGGACCACAAGGCCGGCGACGCGGGCGG CGACGGAATCGGCGGCATGTGGCACGTCGCACGGCCGTGA
Upstream 100 bases:
>100_bases CGAGTTCCGGCACCGCCGGCCGGCGGGATAATGATCGCGACGCAGCCGATCGTCCCGTCCGGCGGCATCGTGTCGCGACA CGACGTCAAGGAGAACGGGA
Downstream 100 bases:
>100_bases CCGCGCGGCGACGCGCGAGGCATCCCGATGAGCTATGAGTCGGACCTGCTGGTGTGGCTTCCGCATCTCACGCGCTATGC GCGTGCGCTGACGGGCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Secreted Repeat-Containing Protein; Signal Peptide Protein; Secreted Repeat Protein; Secreted Protein; Exported Protein
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MKRMLFAAALTAAIVRPAAAEPPQVADGKLVDEAHMTLYVFDRDAPGKSMCDGTCAANWPPALADAYDKASGALSLVARD DGKKQWAYRGRPLYRWKMDHKAGDAGGDGIGGMWHVARP
Sequences:
>Translated_119_residues MKRMLFAAALTAAIVRPAAAEPPQVADGKLVDEAHMTLYVFDRDAPGKSMCDGTCAANWPPALADAYDKASGALSLVARD DGKKQWAYRGRPLYRWKMDHKAGDAGGDGIGGMWHVARP >Mature_119_residues MKRMLFAAALTAAIVRPAAAEPPQVADGKLVDEAHMTLYVFDRDAPGKSMCDGTCAANWPPALADAYDKASGALSLVARD DGKKQWAYRGRPLYRWKMDHKAGDAGGDGIGGMWHVARP
Specific function: Unknown
COG id: COG4315
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12787; Mature: 12787
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRMLFAAALTAAIVRPAAAEPPQVADGKLVDEAHMTLYVFDRDAPGKSMCDGTCAANWP CCHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCEEEEEEECCCCCCCCCCCCCCCCCC PALADAYDKASGALSLVARDDGKKQWAYRGRPLYRWKMDHKAGDAGGDGIGGMWHVARP CHHHHHHCCCCCEEEEEEECCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCEEEECCC >Mature Secondary Structure MKRMLFAAALTAAIVRPAAAEPPQVADGKLVDEAHMTLYVFDRDAPGKSMCDGTCAANWP CCHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCEEEEEEECCCCCCCCCCCCCCCCCC PALADAYDKASGALSLVARDDGKKQWAYRGRPLYRWKMDHKAGDAGGDGIGGMWHVARP CHHHHHHCCCCCEEEEEEECCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA