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The map label for this gene is ctrB [H]

Identifier: 116688801

GI number: 116688801

Start: 875285

End: 876433

Strand: Reverse

Name: ctrB [H]

Synonym: Bcen2424_0778

Alternate gene names: 116688801

Gene position: 876433-875285 (Counterclockwise)

Preceding gene: 116688809

Following gene: 116688800

Centisome position: 25.16

GC content: 55.09

Gene sequence:

>1149_bases
ATGGAAGTTACCGCTCCTTCCGCTGCACACCGAGACTCTCTGGTGCACAAACTAACGAACAAGCTTCGCCGCGCCAGCCC
GCTCTTTATTTGCACCGTGGTCATCCCGACAGTTGTCGCAACGACTTACTATGGGCTGATTGCATCCGACGTCTACATTT
CGGAATCTCGCTTCGTGGTACGGAGCCCCGAACGCCAATCCCAGACCACACTCGGCGCCTTACTCACAAACACCGGCCTG
TCGCGCTCACAGGACGACAGCTATACGGTTGAAGACTATATTCTCTCGCGTGACGCACTGAAGCGACTGAACGAGAAAGT
CAACGTTGCCGGCGGTTACTCAGCATCGACAGTTGACATATTCAGCAGGTTTGGCGGCTTCTCGTTCGACAAGAGCTTTG
AAGCGCTTTACCGCTACTACCAGAACAAGGTAACCGTCCAACTTGACTCGGCATCGTCGATCACGACCCTCACCACGCGC
GCGTTCACGCCGGAGCAAGCATACGCAGCGAACGAGAACCTGATCGAGATGAGCGAGGGTTTGGTGAACCAGCTCAACAA
CCGCGCACGCGAAGACATGATCAAGTTTGCATCGCGTGAAGTCGAGACGGCAGAACAACGCGCCAGAACCGCAGCACTCA
ACCTTTCGGATTACCGTAACAAGAAGGGAGTCATCGATCCCGAACGCCAGTCTGCCCTGCAACTTCAGCAGGTCGCCAAC
CTACAAGATGAAATGGCTTCGGCTACCGTGACGCTCAACCAGGTCAGACAGGCGTCGCGCGACAACCCGCAAATTCCGAT
TCTGGAGAACCGCATCAGTTCGTTACGCGACGAGATTGCAAAAAGAAACAATCAAGTCACTGGCGGCGACCGCTCGCTTG
CCAACAAGGCCGCCGAATACGAGCGCCTCTCTCTCGAAAGAGACTTTGCCGATAAGCAACTTGCGATCGCACTCTCATCT
CTCGAGCAAGCCAGGAACGACGCGATGCGTAAGCAGCTCTACCTCGAACGTGTCGTGCAGCCGTCCAAACCGGATATGGC
ACTCGAACCGCGCCGCCTGAGAAACATTCTTGCGACCTTGATCCTCGGCATTATTGCATGGGGTGTTTTAACTATTCTGA
TTGCCGGCATTCGAGAGCATCGTGACTGA

Upstream 100 bases:

>100_bases
TGTCGCAGCTTACTTGAGGTCTCTGTCTGCTGCCCCGCGCCCTCCTTGTTTGACGCGACATATCCGCCAAACCCCACTTT
TTGATTGTGATCGATTCGAA

Downstream 100 bases:

>100_bases
CACGACATCGACCATCAAGCCCTCCCTCTGGCGCTCGTTCGAAATACAGCGCCAGGTCATCTTCGCGTTGCTGATGCGCG
AGATCATCACCCGATATGGA

Product: lipopolysaccharide biosynthesis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MEVTAPSAAHRDSLVHKLTNKLRRASPLFICTVVIPTVVATTYYGLIASDVYISESRFVVRSPERQSQTTLGALLTNTGL
SRSQDDSYTVEDYILSRDALKRLNEKVNVAGGYSASTVDIFSRFGGFSFDKSFEALYRYYQNKVTVQLDSASSITTLTTR
AFTPEQAYAANENLIEMSEGLVNQLNNRAREDMIKFASREVETAEQRARTAALNLSDYRNKKGVIDPERQSALQLQQVAN
LQDEMASATVTLNQVRQASRDNPQIPILENRISSLRDEIAKRNNQVTGGDRSLANKAAEYERLSLERDFADKQLAIALSS
LEQARNDAMRKQLYLERVVQPSKPDMALEPRRLRNILATLILGIIAWGVLTILIAGIREHRD

Sequences:

>Translated_382_residues
MEVTAPSAAHRDSLVHKLTNKLRRASPLFICTVVIPTVVATTYYGLIASDVYISESRFVVRSPERQSQTTLGALLTNTGL
SRSQDDSYTVEDYILSRDALKRLNEKVNVAGGYSASTVDIFSRFGGFSFDKSFEALYRYYQNKVTVQLDSASSITTLTTR
AFTPEQAYAANENLIEMSEGLVNQLNNRAREDMIKFASREVETAEQRARTAALNLSDYRNKKGVIDPERQSALQLQQVAN
LQDEMASATVTLNQVRQASRDNPQIPILENRISSLRDEIAKRNNQVTGGDRSLANKAAEYERLSLERDFADKQLAIALSS
LEQARNDAMRKQLYLERVVQPSKPDMALEPRRLRNILATLILGIIAWGVLTILIAGIREHRD
>Mature_382_residues
MEVTAPSAAHRDSLVHKLTNKLRRASPLFICTVVIPTVVATTYYGLIASDVYISESRFVVRSPERQSQTTLGALLTNTGL
SRSQDDSYTVEDYILSRDALKRLNEKVNVAGGYSASTVDIFSRFGGFSFDKSFEALYRYYQNKVTVQLDSASSITTLTTR
AFTPEQAYAANENLIEMSEGLVNQLNNRAREDMIKFASREVETAEQRARTAALNLSDYRNKKGVIDPERQSALQLQQVAN
LQDEMASATVTLNQVRQASRDNPQIPILENRISSLRDEIAKRNNQVTGGDRSLANKAAEYERLSLERDFADKQLAIALSS
LEQARNDAMRKQLYLERVVQPSKPDMALEPRRLRNILATLILGIIAWGVLTILIAGIREHRD

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the CtrC and CtrD proteins [H]

COG id: COG3524

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexC/CtrB/KpsE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005705 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42811; Mature: 42811

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVTAPSAAHRDSLVHKLTNKLRRASPLFICTVVIPTVVATTYYGLIASDVYISESRFVV
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEE
RSPERQSQTTLGALLTNTGLSRSQDDSYTVEDYILSRDALKRLNEKVNVAGGYSASTVDI
ECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
FSRFGGFSFDKSFEALYRYYQNKVTVQLDSASSITTLTTRAFTPEQAYAANENLIEMSEG
HHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEHHCCCCCCHHHHHCCCCHHHHHHH
LVNQLNNRAREDMIKFASREVETAEQRARTAALNLSDYRNKKGVIDPERQSALQLQQVAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHH
LQDEMASATVTLNQVRQASRDNPQIPILENRISSLRDEIAKRNNQVTGGDRSLANKAAEY
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
ERLSLERDFADKQLAIALSSLEQARNDAMRKQLYLERVVQPSKPDMALEPRRLRNILATL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
ILGIIAWGVLTILIAGIREHRD
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEVTAPSAAHRDSLVHKLTNKLRRASPLFICTVVIPTVVATTYYGLIASDVYISESRFVV
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEE
RSPERQSQTTLGALLTNTGLSRSQDDSYTVEDYILSRDALKRLNEKVNVAGGYSASTVDI
ECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
FSRFGGFSFDKSFEALYRYYQNKVTVQLDSASSITTLTTRAFTPEQAYAANENLIEMSEG
HHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEHHCCCCCCHHHHHCCCCHHHHHHH
LVNQLNNRAREDMIKFASREVETAEQRARTAALNLSDYRNKKGVIDPERQSALQLQQVAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHH
LQDEMASATVTLNQVRQASRDNPQIPILENRISSLRDEIAKRNNQVTGGDRSLANKAAEY
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
ERLSLERDFADKQLAIALSSLEQARNDAMRKQLYLERVVQPSKPDMALEPRRLRNILATL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
ILGIIAWGVLTILIAGIREHRD
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1659649; 10710307 [H]