Click here to switch to the map view.

The map label for this gene is ctrC [H]

Identifier: 116688800

GI number: 116688800

Start: 874486

End: 875313

Strand: Reverse

Name: ctrC [H]

Synonym: Bcen2424_0777

Alternate gene names: 116688800

Gene position: 875313-874486 (Counterclockwise)

Preceding gene: 116688801

Following gene: 116688799

Centisome position: 25.12

GC content: 56.28

Gene sequence:

>828_bases
TTGCCGGCATTCGAGAGCATCGTGACTGACACGACATCGACCATCAAGCCCTCCCTCTGGCGCTCGTTCGAAATACAGCG
CCAGGTCATCTTCGCGTTGCTGATGCGCGAGATCATCACCCGATATGGACGCCACAATTTCGGCTTTCTGTGGCTCTTTC
TCGAGCCGATGATGTTCACGTCGGGGGTCACGATCGTCTGGTCCCTCGGACACTTCACCCACGGCTCGAATCTGCCCATC
GCCGGCTTCGCCGTAACTGGCTACTCGTCACTGCTTGTCTGGCGAAATTCTGGGAATCGGTGTTCGAAGGCGATTGAACC
AAACCTGAGTTTGCTATACCACCGCAACGTCCGGGTGCTCGACGTCTTCCTGTCACGCCTGATTCTCGAGACAGCAGGCG
CGACAGCATCTCTGTCGCTCCTGATCCTTATCTTTACCGCGCTCGGCTTAGCTACGTTTCCTGCAGACCTACTCACAATG
ACGACCGGCTGGCTGTTGCAATGCTGGTTCGCATTCGCCATCGGCCTTACAATCGGTGCGGCATCGGAGCGCTCGGAGGT
GTTTGAGCGAGTATGGCACACCGCCACGTACCTGCTCTTCCCGTTCTCGGGTGCTGTCTTCATGGTCGACTGGCTACCCA
AAGCTGTCCACCCGTACATTCTCGTATTGCCAATGGTTCACGGCGCCGAAATGATCCGGCACGGCTATTTTGGAAACATT
GTCCGAACCCATGAAGATCCAATCTATTTCATCGCCGCCAATTCGGTGCTTACGCTGATCGGAATGATGCTCGTCAGGGA
CGTCAGCAAGCGTGTGGAGCCCGAATGA

Upstream 100 bases:

>100_bases
CCGTCCAAACCGGATATGGCACTCGAACCGCGCCGCCTGAGAAACATTCTTGCGACCTTGATCCTCGGCATTATTGCATG
GGGTGTTTTAACTATTCTGA

Downstream 100 bases:

>100_bases
TCGCGATCAAAGCTGTTACAAAGGTATATCACACCCGCCAAGGCCCGCGCGTCGTTCTTGACCAGATCGACCTGAATGTC
CAGAGAGGAGAAAAAATCGG

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MPAFESIVTDTTSTIKPSLWRSFEIQRQVIFALLMREIITRYGRHNFGFLWLFLEPMMFTSGVTIVWSLGHFTHGSNLPI
AGFAVTGYSSLLVWRNSGNRCSKAIEPNLSLLYHRNVRVLDVFLSRLILETAGATASLSLLILIFTALGLATFPADLLTM
TTGWLLQCWFAFAIGLTIGAASERSEVFERVWHTATYLLFPFSGAVFMVDWLPKAVHPYILVLPMVHGAEMIRHGYFGNI
VRTHEDPIYFIAANSVLTLIGMMLVRDVSKRVEPE

Sequences:

>Translated_275_residues
MPAFESIVTDTTSTIKPSLWRSFEIQRQVIFALLMREIITRYGRHNFGFLWLFLEPMMFTSGVTIVWSLGHFTHGSNLPI
AGFAVTGYSSLLVWRNSGNRCSKAIEPNLSLLYHRNVRVLDVFLSRLILETAGATASLSLLILIFTALGLATFPADLLTM
TTGWLLQCWFAFAIGLTIGAASERSEVFERVWHTATYLLFPFSGAVFMVDWLPKAVHPYILVLPMVHGAEMIRHGYFGNI
VRTHEDPIYFIAANSVLTLIGMMLVRDVSKRVEPE
>Mature_274_residues
PAFESIVTDTTSTIKPSLWRSFEIQRQVIFALLMREIITRYGRHNFGFLWLFLEPMMFTSGVTIVWSLGHFTHGSNLPIA
GFAVTGYSSLLVWRNSGNRCSKAIEPNLSLLYHRNVRVLDVFLSRLILETAGATASLSLLILIFTALGLATFPADLLTMT
TGWLLQCWFAFAIGLTIGAASERSEVFERVWHTATYLLFPFSGAVFMVDWLPKAVHPYILVLPMVHGAEMIRHGYFGNIV
RTHEDPIYFIAANSVLTLIGMMLVRDVSKRVEPE

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the CtrB and CtrD proteins [H]

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 30993; Mature: 30862

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAFESIVTDTTSTIKPSLWRSFEIQRQVIFALLMREIITRYGRHNFGFLWLFLEPMMFT
CCCHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
SGVTIVWSLGHFTHGSNLPIAGFAVTGYSSLLVWRNSGNRCSKAIEPNLSLLYHRNVRVL
CCCEEEEEECCCCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHCCCCCEEEEECCCHHH
DVFLSRLILETAGATASLSLLILIFTALGLATFPADLLTMTTGWLLQCWFAFAIGLTIGA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
ASERSEVFERVWHTATYLLFPFSGAVFMVDWLPKAVHPYILVLPMVHGAEMIRHGYFGNI
CCHHHHHHHHHHHHHHHHEEECCCCEEEEEHHHHHHCCCEEEHHHHHHHHHHHCCCCCCE
VRTHEDPIYFIAANSVLTLIGMMLVRDVSKRVEPE
EEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PAFESIVTDTTSTIKPSLWRSFEIQRQVIFALLMREIITRYGRHNFGFLWLFLEPMMFT
CCHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
SGVTIVWSLGHFTHGSNLPIAGFAVTGYSSLLVWRNSGNRCSKAIEPNLSLLYHRNVRVL
CCCEEEEEECCCCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHCCCCCEEEEECCCHHH
DVFLSRLILETAGATASLSLLILIFTALGLATFPADLLTMTTGWLLQCWFAFAIGLTIGA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
ASERSEVFERVWHTATYLLFPFSGAVFMVDWLPKAVHPYILVLPMVHGAEMIRHGYFGNI
CCHHHHHHHHHHHHHHHHEEECCCCEEEEEHHHHHHCCCEEEHHHHHHHHHHHCCCCCCE
VRTHEDPIYFIAANSVLTLIGMMLVRDVSKRVEPE
EEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1659649; 10710307 [H]