| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is hemH [H]
Identifier: 116688769
GI number: 116688769
Start: 838365
End: 839429
Strand: Direct
Name: hemH [H]
Synonym: Bcen2424_0746
Alternate gene names: 116688769
Gene position: 838365-839429 (Clockwise)
Preceding gene: 116688768
Following gene: 116688770
Centisome position: 24.06
GC content: 67.61
Gene sequence:
>1065_bases ATGCGTTTCGATCTTGAGCCGCCTTCGAGCGTCGCGGCCGCCCATCGCATCGGTGTGCTGCTGATCAATCTCGGCACACC CGACGCGCCCACGCCGCGCGCGGTACGGCGCTATCTGGCCGAATTCCTGTCGGACCCGCGGGTCGTCGAAATCCCGCAGG CCGTCTGGCAGGTGCTGCTGCGCACGCTGATCCTGCCGCTGCGCGGCCGCGCGTCCGCGAAGAAATACGCGGCTGTCTGG ATGCCCGAGGGTTCGCCGCTGCGCGTGTACACCGAGCGCCAGACCGACAGCGTGCGCCATCTGCTCACGTCGAACGGCTA TCACGTGATGGTGGACTACGCGATGCGCTACGGCAGCCCGAACATTTCGCATGCGCTCACGCAGTTCAAGCGCGCCGGCG TCGAGCGCGTGCTGCTGATGCCGATGTATCCGCAATACTCGGCGTCGACCACGGCCACCACCTTCGATGCCGCGTTCGAC GCGCTGGCGCGCATGCGCAATCAGCCGGAAGTGCGCACGGTGCGGCACTACGCCGACCATCCGGCCTATATCCATGCGCT GGCCGAGCAGGTGCGCCAGTACTGGGCGCAGCACGGCCGGCCCGATTTCGCGGCCGGCGACAAACTCGTGCTGAGTTTCC ATGGCGTGCCGAAGCGCACGCTCGATCTCGGCGACCCGTATCACGACCAGTGTCAGCAGACGGGCGCGTTGCTGATGGCC GCGCTCGGGCTGTCGACCACCGAATGCCGCGTCACGTTCCAGTCACGCTTCGGCAAGGCCGAATGGCTGCAGCCGTACAC CGCGCCGACGCTGCGCGAATTCGGCGAGGCCGGCGTGCGGCGCGCCGACGTGTTCTGTCCCGGCTTCACGGCCGATTGCC TGGAGACGATCGAGGAAATCGGCATGGAGGTGCGCGACGAGTTCCTCGCCGGCGGCGGCACGACTTTCCACCGGATTCCG TGCCTGAACGGCGCGTCCGCGTGGATCGGTGCGCTCAGCGAGATCGTCGCGGAGAATCTGCAGGGCTGGCCCGTCAAGGC TGCGCAGCCCGAACCGGTCAACTGA
Upstream 100 bases:
>100_bases TGCCGCGCCGCCGCTCGCGGCGACAGTCGGCCGAACGGCACGGGGCGGCCCGCTATAATCGAGGACCGTCCGGTCCCGTG CCTCGAGCACGTTCTTGCCC
Downstream 100 bases:
>100_bases GATGAAACGACTGCCGCGTCCACTGCACCCGCTGCCGCCCGAAGGCGCGGCCGGCCTTTGCAGGGCGGCCCGGCGGAGAC TGACATGAACTACAAGATTT
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MRFDLEPPSSVAAAHRIGVLLINLGTPDAPTPRAVRRYLAEFLSDPRVVEIPQAVWQVLLRTLILPLRGRASAKKYAAVW MPEGSPLRVYTERQTDSVRHLLTSNGYHVMVDYAMRYGSPNISHALTQFKRAGVERVLLMPMYPQYSASTTATTFDAAFD ALARMRNQPEVRTVRHYADHPAYIHALAEQVRQYWAQHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHDQCQQTGALLMA ALGLSTTECRVTFQSRFGKAEWLQPYTAPTLREFGEAGVRRADVFCPGFTADCLETIEEIGMEVRDEFLAGGGTTFHRIP CLNGASAWIGALSEIVAENLQGWPVKAAQPEPVN
Sequences:
>Translated_354_residues MRFDLEPPSSVAAAHRIGVLLINLGTPDAPTPRAVRRYLAEFLSDPRVVEIPQAVWQVLLRTLILPLRGRASAKKYAAVW MPEGSPLRVYTERQTDSVRHLLTSNGYHVMVDYAMRYGSPNISHALTQFKRAGVERVLLMPMYPQYSASTTATTFDAAFD ALARMRNQPEVRTVRHYADHPAYIHALAEQVRQYWAQHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHDQCQQTGALLMA ALGLSTTECRVTFQSRFGKAEWLQPYTAPTLREFGEAGVRRADVFCPGFTADCLETIEEIGMEVRDEFLAGGGTTFHRIP CLNGASAWIGALSEIVAENLQGWPVKAAQPEPVN >Mature_354_residues MRFDLEPPSSVAAAHRIGVLLINLGTPDAPTPRAVRRYLAEFLSDPRVVEIPQAVWQVLLRTLILPLRGRASAKKYAAVW MPEGSPLRVYTERQTDSVRHLLTSNGYHVMVDYAMRYGSPNISHALTQFKRAGVERVLLMPMYPQYSASTTATTFDAAFD ALARMRNQPEVRTVRHYADHPAYIHALAEQVRQYWAQHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHDQCQQTGALLMA ALGLSTTECRVTFQSRFGKAEWLQPYTAPTLREFGEAGVRRADVFCPGFTADCLETIEEIGMEVRDEFLAGGGTTFHRIP CLNGASAWIGALSEIVAENLQGWPVKAAQPEPVN
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=269, Percent_Identity=24.907063197026, Blast_Score=96, Evalue=7e-20, Organism=Homo sapiens, GI60499025, Length=270, Percent_Identity=25.5555555555556, Blast_Score=96, Evalue=7e-20, Organism=Escherichia coli, GI1786681, Length=322, Percent_Identity=45.6521739130435, Blast_Score=279, Evalue=2e-76, Organism=Saccharomyces cerevisiae, GI6324750, Length=335, Percent_Identity=24.7761194029851, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI17864156, Length=341, Percent_Identity=24.633431085044, Blast_Score=98, Evalue=8e-21, Organism=Drosophila melanogaster, GI24651774, Length=270, Percent_Identity=24.8148148148148, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 39392; Mature: 39392
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFDLEPPSSVAAAHRIGVLLINLGTPDAPTPRAVRRYLAEFLSDPRVVEIPQAVWQVLL CCCCCCCCHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHH RTLILPLRGRASAKKYAAVWMPEGSPLRVYTERQTDSVRHLLTSNGYHVMVDYAMRYGSP HHHHHHCCCCCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEHHHHCCCC NISHALTQFKRAGVERVLLMPMYPQYSASTTATTFDAAFDALARMRNQPEVRTVRHYADH CHHHHHHHHHHHCHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCC PAYIHALAEQVRQYWAQHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHDQCQQTGALLMA HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH ALGLSTTECRVTFQSRFGKAEWLQPYTAPTLREFGEAGVRRADVFCPGFTADCLETIEEI HHCCCCHHHEEEHHHHCCCHHHCCCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHH GMEVRDEFLAGGGTTFHRIPCLNGASAWIGALSEIVAENLQGWPVKAAQPEPVN HHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MRFDLEPPSSVAAAHRIGVLLINLGTPDAPTPRAVRRYLAEFLSDPRVVEIPQAVWQVLL CCCCCCCCHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHH RTLILPLRGRASAKKYAAVWMPEGSPLRVYTERQTDSVRHLLTSNGYHVMVDYAMRYGSP HHHHHHCCCCCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEHHHHCCCC NISHALTQFKRAGVERVLLMPMYPQYSASTTATTFDAAFDALARMRNQPEVRTVRHYADH CHHHHHHHHHHHCHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCC PAYIHALAEQVRQYWAQHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHDQCQQTGALLMA HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH ALGLSTTECRVTFQSRFGKAEWLQPYTAPTLREFGEAGVRRADVFCPGFTADCLETIEEI HHCCCCHHHEEEHHHHCCCHHHCCCCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHH GMEVRDEFLAGGGTTFHRIPCLNGASAWIGALSEIVAENLQGWPVKAAQPEPVN HHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA