| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is recG [H]
Identifier: 116688747
GI number: 116688747
Start: 805697
End: 808012
Strand: Direct
Name: recG [H]
Synonym: Bcen2424_0724
Alternate gene names: 116688747
Gene position: 805697-808012 (Clockwise)
Preceding gene: 116688740
Following gene: 116688748
Centisome position: 23.13
GC content: 71.63
Gene sequence:
>2316_bases GTGTCACCACGCCGTTCCCCCGCTGCCGTTGCCGATTCCGCCGATCCGTTCGACGCGGACGATGCCGCGTCGCCCGCGCC GTCCGCATCGGGCCCCGGCGCCCGCCGCGCCGGCCCGAAGCGCGGCGCCGACGGCCGGCTCGCGCAGCCCGCGGCCGCCG CGCCCGACGCCGAACCGGGCGCGGGCGGCGACGAAGCGGATGCGCCCGGCGCATCCGGCGCGAAGCGCAAGAAGAAGCCG GCCGCCGACAAGCCCGTGAAAACCGCCGACAAGCTCGCGAAGCTCGGCCTCACGCGTTCGATCGATCTCGTGCTGCATCT GCCGATGCGCTACGAGGACGAGACCACGCTCACGCCGATCGGCGAGTTGCTGCCGGGCGGCATCGCGCAGACCGAAGGCG TCGTGTTCGACAACGAGGTTGCGTACCGGCCGCGTCGCCAGCTCGTCGTGAAGATCCAGGACGACGACGGCGAGCAGCTC GTGCTGCGCTTCCTGAACTTCTACGGGTCGCAGGTCAAGCAGATGGCCGTCGGCCAGCGGCTGCGCGTGCGCGGCGACGT GCGTGGCGGCTTTTTCGGGATGGAGATGGTGCATCCGGCCGTGCGCGTGGTCGAAGCCGATGCGCCGCTGCCGCAGGTGC TCACGCCCGTCTACCCGAGCACGGCCGGCGTGTCGCAGGCGTATCTGCGCAAGGCGATCGAGAACGCGGTCGAGCGCACG CCGCTGCCCGAACTGCTGCCGCCCGAGATCCAGCGCGATTATCTGAAGCCGCTCGACGTGCCGACGCTCGAGCAGGCGGT GCGCATCCTGCATCACCCGCGCGTCGATTCCGACGAAGCCGCGCTGATGGACGGCTCGCACCCTGCGTGGACGCGCATCA AGTTCGAGGAACTGCTCGCGCAGCAGTTGTCGCTGAAGCGCGCGCACGAAGAGCGCCGCACGCGCGCCGCGCCCGCGATG CCGCGTCGCGCCGCGACCGATACCGATGCGCTGACCACGCGCCTGTACGCGGCGCTGCCGTTTACGCTGACGGGCGCGCA GGCGCGCGTCGTCGACGAGATCGCGCACGACCTCACGCTTGCGCACCCGATGCAGCGGCTGCTGCAGGGCGACGTCGGCA GCGGCAAGACGGTCGTCGCGGCGCTGGCCGCCACGCAGGCGATCGACGCCGGCTACCAGGCCGCGCTGATGGCGCCCACC GAAATCCTCGCGGAACAGCACGCGCGCAAGCTGCGCGCGTGGCTCGAGCCGCTCGGGGTCACGGTCGCGTGGCTCGCGGG CAGCCTGAAGGCGAAGGAAAAGCGCGCGGCGATCGAGGCGGCCGCGCTCGGCACGGCGCAGCTCGTGATCGGCACGCACG CGATCATCCAGGACACGGTCGAATTCGCGCGGCTCGGCCTCGTGATCGTCGACGAGCAGCACCGCTTCGGCGTCGAGCAG CGTCTCGCGCTGCGCGCGAAGGCCGCGAACGCCGCCAACGGCGCACGCGACTTTCAGCCGCACCAGTTGATGATGTCGGC CACGCCGATCCCGCGCACGCTCGCGATGACGTATTACGCCGATCTCGAGGTGTCGACGATCGACGAGTTGCCGCCCGGTC GCACGCCGGTGCTGACGCGGCTGGTGGGCGACGCGCGGCGCGAAGAAGTGATCGCCCGCGTGCGCGAGGCCGCGCTGACC GGGCGCCAGGTGTACTGGGTATGCCCGCTGATCGAGGAGAGCGAGACGCTGCAGCTGCAGACGGCCGTCGAAACCTACGA GACGCTTGCCGCGGCGCTGCCCGAACTGAAGGTCGGGCTCGTACACGGCCGGCTGTCGCCGGCCGACAAGGCGGCCGTGA TGGAGGCGTTCACGCGCAACGAAGTGCAGCTGCTGGTCGCGACGACGGTGATCGAGGTCGGCGTCGACGTGCCGAACGCG TCGCTGATGGTGATCGAGCACGCGGAGCGCTTCGGCCTCGCGCAGCTGCACCAGTTGCGCGGCCGGGTCGGGCGCGGCAC CGCGGCGTCGGTGTGCGTGCTGCTGTACACCGGGCCGCTGTCGCTCACCGGCCGCGAGCGGCTGAAGACGATGCGCGAGA CGACCGACGGCTTCGAGATCGCGCGGCGCGACCTCGAAATCCGCGGGCCCGGCGAATTCCTCGGCGCGCGCCAGTCGGGC GCGGCGATGCTGCGCTTTGCGAACCTCGAGACCGACGGCTGGCTGATCGACCCGGCCCGCGAGGCCGCGGCGCGGCTGAT TGCCGCGTACCCCGAGGTCGTCACGCAGCATCTCGCGCGCTGGCTCGGTGCGCGCGAACAGTATCTGAAGGCCTGA
Upstream 100 bases:
>100_bases ATGATGACGGGATGCGCGGCCTGGCCGGCGTCGTTCGTTCGGACGACGTGAAAGCCGCTATTGTACTTGCCTTGCGAAGC ACCCAGACGATCCGATGCCT
Downstream 100 bases:
>100_bases TCGACCGGCTCGGGGCCGGATCGAAAGCCGCCAGTCGACGCCAATTCGACGCCGATCGACGCATCGCGATGCAGAGAAAC TTGGCGAATCGGTGCCAACA
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 771; Mature: 770
Protein sequence:
>771_residues MSPRRSPAAVADSADPFDADDAASPAPSASGPGARRAGPKRGADGRLAQPAAAAPDAEPGAGGDEADAPGASGAKRKKKP AADKPVKTADKLAKLGLTRSIDLVLHLPMRYEDETTLTPIGELLPGGIAQTEGVVFDNEVAYRPRRQLVVKIQDDDGEQL VLRFLNFYGSQVKQMAVGQRLRVRGDVRGGFFGMEMVHPAVRVVEADAPLPQVLTPVYPSTAGVSQAYLRKAIENAVERT PLPELLPPEIQRDYLKPLDVPTLEQAVRILHHPRVDSDEAALMDGSHPAWTRIKFEELLAQQLSLKRAHEERRTRAAPAM PRRAATDTDALTTRLYAALPFTLTGAQARVVDEIAHDLTLAHPMQRLLQGDVGSGKTVVAALAATQAIDAGYQAALMAPT EILAEQHARKLRAWLEPLGVTVAWLAGSLKAKEKRAAIEAAALGTAQLVIGTHAIIQDTVEFARLGLVIVDEQHRFGVEQ RLALRAKAANAANGARDFQPHQLMMSATPIPRTLAMTYYADLEVSTIDELPPGRTPVLTRLVGDARREEVIARVREAALT GRQVYWVCPLIEESETLQLQTAVETYETLAAALPELKVGLVHGRLSPADKAAVMEAFTRNEVQLLVATTVIEVGVDVPNA SLMVIEHAERFGLAQLHQLRGRVGRGTAASVCVLLYTGPLSLTGRERLKTMRETTDGFEIARRDLEIRGPGEFLGARQSG AAMLRFANLETDGWLIDPAREAAARLIAAYPEVVTQHLARWLGAREQYLKA
Sequences:
>Translated_771_residues MSPRRSPAAVADSADPFDADDAASPAPSASGPGARRAGPKRGADGRLAQPAAAAPDAEPGAGGDEADAPGASGAKRKKKP AADKPVKTADKLAKLGLTRSIDLVLHLPMRYEDETTLTPIGELLPGGIAQTEGVVFDNEVAYRPRRQLVVKIQDDDGEQL VLRFLNFYGSQVKQMAVGQRLRVRGDVRGGFFGMEMVHPAVRVVEADAPLPQVLTPVYPSTAGVSQAYLRKAIENAVERT PLPELLPPEIQRDYLKPLDVPTLEQAVRILHHPRVDSDEAALMDGSHPAWTRIKFEELLAQQLSLKRAHEERRTRAAPAM PRRAATDTDALTTRLYAALPFTLTGAQARVVDEIAHDLTLAHPMQRLLQGDVGSGKTVVAALAATQAIDAGYQAALMAPT EILAEQHARKLRAWLEPLGVTVAWLAGSLKAKEKRAAIEAAALGTAQLVIGTHAIIQDTVEFARLGLVIVDEQHRFGVEQ RLALRAKAANAANGARDFQPHQLMMSATPIPRTLAMTYYADLEVSTIDELPPGRTPVLTRLVGDARREEVIARVREAALT GRQVYWVCPLIEESETLQLQTAVETYETLAAALPELKVGLVHGRLSPADKAAVMEAFTRNEVQLLVATTVIEVGVDVPNA SLMVIEHAERFGLAQLHQLRGRVGRGTAASVCVLLYTGPLSLTGRERLKTMRETTDGFEIARRDLEIRGPGEFLGARQSG AAMLRFANLETDGWLIDPAREAAARLIAAYPEVVTQHLARWLGAREQYLKA >Mature_770_residues SPRRSPAAVADSADPFDADDAASPAPSASGPGARRAGPKRGADGRLAQPAAAAPDAEPGAGGDEADAPGASGAKRKKKPA ADKPVKTADKLAKLGLTRSIDLVLHLPMRYEDETTLTPIGELLPGGIAQTEGVVFDNEVAYRPRRQLVVKIQDDDGEQLV LRFLNFYGSQVKQMAVGQRLRVRGDVRGGFFGMEMVHPAVRVVEADAPLPQVLTPVYPSTAGVSQAYLRKAIENAVERTP LPELLPPEIQRDYLKPLDVPTLEQAVRILHHPRVDSDEAALMDGSHPAWTRIKFEELLAQQLSLKRAHEERRTRAAPAMP RRAATDTDALTTRLYAALPFTLTGAQARVVDEIAHDLTLAHPMQRLLQGDVGSGKTVVAALAATQAIDAGYQAALMAPTE ILAEQHARKLRAWLEPLGVTVAWLAGSLKAKEKRAAIEAAALGTAQLVIGTHAIIQDTVEFARLGLVIVDEQHRFGVEQR LALRAKAANAANGARDFQPHQLMMSATPIPRTLAMTYYADLEVSTIDELPPGRTPVLTRLVGDARREEVIARVREAALTG RQVYWVCPLIEESETLQLQTAVETYETLAAALPELKVGLVHGRLSPADKAAVMEAFTRNEVQLLVATTVIEVGVDVPNAS LMVIEHAERFGLAQLHQLRGRVGRGTAASVCVLLYTGPLSLTGRERLKTMRETTDGFEIARRDLEIRGPGEFLGARQSGA AMLRFANLETDGWLIDPAREAAARLIAAYPEVVTQHLARWLGAREQYLKA
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=692, Percent_Identity=52.8901734104046, Blast_Score=644, Evalue=0.0, Organism=Escherichia coli, GI1787357, Length=393, Percent_Identity=38.1679389312977, Blast_Score=228, Evalue=1e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 83413; Mature: 83281
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPRRSPAAVADSADPFDADDAASPAPSASGPGARRAGPKRGADGRLAQPAAAAPDAEPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGGDEADAPGASGAKRKKKPAADKPVKTADKLAKLGLTRSIDLVLHLPMRYEDETTLTPI CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCH GELLPGGIAQTEGVVFDNEVAYRPRRQLVVKIQDDDGEQLVLRFLNFYGSQVKQMAVGQR HHHCCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCH LRVRGDVRGGFFGMEMVHPAVRVVEADAPLPQVLTPVYPSTAGVSQAYLRKAIENAVERT HEEEECCCCCCHHHHHHHHHHHEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC PLPELLPPEIQRDYLKPLDVPTLEQAVRILHHPRVDSDEAALMDGSHPAWTRIKFEELLA CCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHHHHH QQLSLKRAHEERRTRAAPAMPRRAATDTDALTTRLYAALPFTLTGAQARVVDEIAHDLTL HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHH AHPMQRLLQGDVGSGKTVVAALAATQAIDAGYQAALMAPTEILAEQHARKLRAWLEPLGV HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHH TVAWLAGSLKAKEKRAAIEAAALGTAQLVIGTHAIIQDTVEFARLGLVIVDEQHRFGVEQ HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHCCHHH RLALRAKAANAANGARDFQPHQLMMSATPIPRTLAMTYYADLEVSTIDELPPGRTPVLTR HHHHHHHHCCCCCCCCCCCCHHHEEECCCCCHHHEEEEEECCEEEHHHCCCCCCCHHHHH LVGDARREEVIARVREAALTGRQVYWVCPLIEESETLQLQTAVETYETLAAALPELKVGL HHHHHHHHHHHHHHHHHHHCCCEEEEEECEECCCCCEEHHHHHHHHHHHHHHCCHHHEEE VHGRLSPADKAAVMEAFTRNEVQLLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLR EECCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHH GRVGRGTAASVCVLLYTGPLSLTGRERLKTMRETTDGFEIARRDLEIRGPGEFLGARQSG HCCCCCCHHHEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHCCEECCCHHHHCCCCCC AAMLRFANLETDGWLIDPAREAAARLIAAYPEVVTQHLARWLGAREQYLKA CEEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC >Mature Secondary Structure SPRRSPAAVADSADPFDADDAASPAPSASGPGARRAGPKRGADGRLAQPAAAAPDAEPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGGDEADAPGASGAKRKKKPAADKPVKTADKLAKLGLTRSIDLVLHLPMRYEDETTLTPI CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCH GELLPGGIAQTEGVVFDNEVAYRPRRQLVVKIQDDDGEQLVLRFLNFYGSQVKQMAVGQR HHHCCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCH LRVRGDVRGGFFGMEMVHPAVRVVEADAPLPQVLTPVYPSTAGVSQAYLRKAIENAVERT HEEEECCCCCCHHHHHHHHHHHEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC PLPELLPPEIQRDYLKPLDVPTLEQAVRILHHPRVDSDEAALMDGSHPAWTRIKFEELLA CCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHHHHH QQLSLKRAHEERRTRAAPAMPRRAATDTDALTTRLYAALPFTLTGAQARVVDEIAHDLTL HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHH AHPMQRLLQGDVGSGKTVVAALAATQAIDAGYQAALMAPTEILAEQHARKLRAWLEPLGV HHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHH TVAWLAGSLKAKEKRAAIEAAALGTAQLVIGTHAIIQDTVEFARLGLVIVDEQHRFGVEQ HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHCCHHH RLALRAKAANAANGARDFQPHQLMMSATPIPRTLAMTYYADLEVSTIDELPPGRTPVLTR HHHHHHHHCCCCCCCCCCCCHHHEEECCCCCHHHEEEEEECCEEEHHHCCCCCCCHHHHH LVGDARREEVIARVREAALTGRQVYWVCPLIEESETLQLQTAVETYETLAAALPELKVGL HHHHHHHHHHHHHHHHHHHCCCEEEEEECEECCCCCEEHHHHHHHHHHHHHHCCHHHEEE VHGRLSPADKAAVMEAFTRNEVQLLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLR EECCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHH GRVGRGTAASVCVLLYTGPLSLTGRERLKTMRETTDGFEIARRDLEIRGPGEFLGARQSG HCCCCCCHHHEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHCCEECCCHHHHCCCCCC AAMLRFANLETDGWLIDPAREAAARLIAAYPEVVTQHLARWLGAREQYLKA CEEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]