| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is nitA [H]
Identifier: 116688727
GI number: 116688727
Start: 783926
End: 784849
Strand: Direct
Name: nitA [H]
Synonym: Bcen2424_0704
Alternate gene names: 116688727
Gene position: 783926-784849 (Clockwise)
Preceding gene: 116688725
Following gene: 116688730
Centisome position: 22.5
GC content: 71.86
Gene sequence:
>924_bases ATGTCCACCTCAGTCATCGCCGCGCTGCAGATCGGCGCATCGCCCGCCGGCACGCGCGCCACGCTCGACACGATCCTCGG CTACGAAACCGCGATCCGCGACAGCGGCGCGTCGCTGGTCGTGCTGCCCGAGGCCGTGCTAGGCGGCTATCCGAAAGGCG AGATCTTCGGCACGCGGCTCGGTTACCGGCTACCCGAGGGGCGCGACGCGTATGCGCGCTACGCCGCGCAAGCGATCGAC GTGCCGGGGCCGGAAACCGACGAGCTGGCCGCGCTGTCGCAGCGCACCGGCGCGAGCCTCGTGGTCGGCGTGATCGAGTG CGGCGGCAGCACGCTGTACTGCACGGCGCTGTTCTTCGATCCGCGCGACGGGCTCGTCGCGAAGCACCGCAAGCTGATGC CGACCGGCACCGAGCGGCTGATCTGGGGGCAGGGCGACGGCTCGACGCTGCCGGTCGTCGACACGGCCGCAGGCCGCGCG GGCGCCGCGATCTGCTGGGAGAACCACATGCCGCTGCTGCGCTGCGCGATGTACGCGAAAGGCGTGCAGATCTGGTGTGC GCCGACCGTCGACGAGCGCGACGTGTGGCAGAGCTCGATGCGGCACATCGCGCACGAAGGGCGCTGCTTCGTCGTGAGCG CGTGCCAGGTGCAGCCGTCGCCGCGCGCGCTCGGCATCGACGTGCCGGGCTGGGACCCCGAGCGGCCGCTGATCCGCGGC GGCAGCGTGATCATCGGGCCGCTCGGCGACCTGCTGGCGGAGCCGCTGATCGGCGAGGCCGGGCTCGTCACGGCGCGCAT CGACACCGACGAGCTCGTGAAGGCGCGCTACGACTTCGACGTCGTCGGCCACTATGCGCGTGCGGACGTGTTTTCGCTGC ACGTCGACGAGCGGCCGAAGCGGCCGGTGGTGTTCGGCGGGTGA
Upstream 100 bases:
>100_bases TCCATATTCATGTCAGTTATCGTTGTATCGATTTGATCGATGAAATGATATCGACAAAGATGGCGTCATCCCACTCACCG CATTCACCGGAGACGCCTTC
Downstream 100 bases:
>100_bases CGAAGTGGGGCCGGGCGCCACATGGCGCCCGGAAAACGAAGGGCGGCGGTGCGTGCCCGCCGCCTTGCCACGTCAGCGCG TCAGCGCATCGGCGCTTCCG
Product: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSTSVIAALQIGASPAGTRATLDTILGYETAIRDSGASLVVLPEAVLGGYPKGEIFGTRLGYRLPEGRDAYARYAAQAID VPGPETDELAALSQRTGASLVVGVIECGGSTLYCTALFFDPRDGLVAKHRKLMPTGTERLIWGQGDGSTLPVVDTAAGRA GAAICWENHMPLLRCAMYAKGVQIWCAPTVDERDVWQSSMRHIAHEGRCFVVSACQVQPSPRALGIDVPGWDPERPLIRG GSVIIGPLGDLLAEPLIGEAGLVTARIDTDELVKARYDFDVVGHYARADVFSLHVDERPKRPVVFGG
Sequences:
>Translated_307_residues MSTSVIAALQIGASPAGTRATLDTILGYETAIRDSGASLVVLPEAVLGGYPKGEIFGTRLGYRLPEGRDAYARYAAQAID VPGPETDELAALSQRTGASLVVGVIECGGSTLYCTALFFDPRDGLVAKHRKLMPTGTERLIWGQGDGSTLPVVDTAAGRA GAAICWENHMPLLRCAMYAKGVQIWCAPTVDERDVWQSSMRHIAHEGRCFVVSACQVQPSPRALGIDVPGWDPERPLIRG GSVIIGPLGDLLAEPLIGEAGLVTARIDTDELVKARYDFDVVGHYARADVFSLHVDERPKRPVVFGG >Mature_306_residues STSVIAALQIGASPAGTRATLDTILGYETAIRDSGASLVVLPEAVLGGYPKGEIFGTRLGYRLPEGRDAYARYAAQAIDV PGPETDELAALSQRTGASLVVGVIECGGSTLYCTALFFDPRDGLVAKHRKLMPTGTERLIWGQGDGSTLPVVDTAAGRAG AAICWENHMPLLRCAMYAKGVQIWCAPTVDERDVWQSSMRHIAHEGRCFVVSACQVQPSPRALGIDVPGWDPERPLIRGG SVIIGPLGDLLAEPLIGEAGLVTARIDTDELVKARYDFDVVGHYARADVFSLHVDERPKRPVVFGG
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI17557111, Length=306, Percent_Identity=46.4052287581699, Blast_Score=276, Evalue=1e-74, Organism=Saccharomyces cerevisiae, GI6322027, Length=199, Percent_Identity=64.8241206030151, Blast_Score=265, Evalue=9e-72, Organism=Saccharomyces cerevisiae, GI6322026, Length=111, Percent_Identity=47.7477477477478, Blast_Score=103, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000132 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: =3.5.5.7 [H]
Molecular weight: Translated: 32738; Mature: 32607
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00921 NITRIL_CHT_2 ; PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSVIAALQIGASPAGTRATLDTILGYETAIRDSGASLVVLPEAVLGGYPKGEIFGTRL CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCCCEEEEEC GYRLPEGRDAYARYAAQAIDVPGPETDELAALSQRTGASLVVGVIECGGSTLYCTALFFD CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEEEC PRDGLVAKHRKLMPTGTERLIWGQGDGSTLPVVDTAAGRAGAAICWENHMPLLRCAMYAK CCCCHHHHHHCCCCCCCCEEEEECCCCCEECEEECCCCCCCEEEEECCCCHHHHHHHHHC GVQIWCAPTVDERDVWQSSMRHIAHEGRCFVVSACQVQPSPRALGIDVPGWDPERPLIRG CEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEECCCCCCCCCEEEC GSVIIGPLGDLLAEPLIGEAGLVTARIDTDELVKARYDFDVVGHYARADVFSLHVDERPK CCEEEECCHHHHHCCCCCCCCEEEEECCHHHHHHHHCCHHHHHHHHHCEEEEEEECCCCC RPVVFGG CCEEECC >Mature Secondary Structure STSVIAALQIGASPAGTRATLDTILGYETAIRDSGASLVVLPEAVLGGYPKGEIFGTRL CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCCCEEEEEC GYRLPEGRDAYARYAAQAIDVPGPETDELAALSQRTGASLVVGVIECGGSTLYCTALFFD CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEEEC PRDGLVAKHRKLMPTGTERLIWGQGDGSTLPVVDTAAGRAGAAICWENHMPLLRCAMYAK CCCCHHHHHHCCCCCCCCEEEEECCCCCEECEEECCCCCCCEEEEECCCCHHHHHHHHHC GVQIWCAPTVDERDVWQSSMRHIAHEGRCFVVSACQVQPSPRALGIDVPGWDPERPLIRG CEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEECCCCCCCCCEEEC GSVIIGPLGDLLAEPLIGEAGLVTARIDTDELVKARYDFDVVGHYARADVFSLHVDERPK CCEEEECCHHHHHCCCCCCCCEEEEECCHHHHHHHHCCHHHHHHHHHCEEEEEEECCCCC RPVVFGG CCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1400390 [H]