| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is pntB [H]
Identifier: 116688725
GI number: 116688725
Start: 781370
End: 782824
Strand: Direct
Name: pntB [H]
Synonym: Bcen2424_0702
Alternate gene names: 116688725
Gene position: 781370-782824 (Clockwise)
Preceding gene: 116688724
Following gene: 116688727
Centisome position: 22.43
GC content: 65.7
Gene sequence:
>1455_bases ATGAGCATGAACGTCGTTACGCTGCTGTACCTCGTCGCGTCGGTGTGCTTCATCCAGGCGCTGAAGGGGCTGTCGAACCC GAAGAGCGCGCGCCGCGGCAACCTGTTCGGGATGGTCGGGATGGCCATCGCGATCCTCACGACGATCGCGCTGATCGTCA AGCAGGCCGCGTGGCTCGGCGCGAACCTGCCGCTCGGCCTCGCGCTCGTGCTCGGCGCGCTGATCGTCGGCGGAGGTGTC GGGGCATTCGTCGCCGCGCGCGTCGAGATGACGAAGATGCCGGAACTCGTCGCGGCGATGCACTCGTTGATCGGTCTCGC GGCCGTGTGCATCGCGTATGCGGTCGTGTCGGAGCCGGAAGCGTTCGGGCTCGTGCCGCAGGACGCGGTGTCGTCGAGCT TCATCCCGTACGGCAACCGCGTCGAGCTGTTCATCGGCACGTTCGTCGGCGCGATCACGTTCTCCGGGTCGGTGATCGCG TTCGGCAAGCTGTCGGGCAAGTACAAGTTCCGGCTGTTCCAGGGCGCGCCGGTCGTGTATGCCGGCCAGCACCTGATCAA CCTGATGCTCGCGATCGCGATGCTCGGCTTCGGCATCCTGTTCTTCATCACGCAGGCGTGGCTGCCGTTCATCATCATGA CGGCGATCGCGTTCGTGCTCGGCGTGCTGATCATCATCCCGATCGGCGGCGCGGACATGCCGGTGGTCGTGTCGATGCTG AACTCGTACTCGGGCTGGGCCGCGGCCGGCATCGGCTTCTCGCTGAACAACGCGATGCTGATCATCGCCGGCTCGCTGGT CGGCTCGTCGGGTGCGATCCTGTCGTACATCATGTGCCACGCGATGAACCGCTCGTTCTTCAACGTGATCCTCGGCGGGT TCGGCGGCGAAGCGGCGGCCGGCGGCGCGGCGGGCGCGCAGGAGCAGCGGCCGGTGAAGTCGGGCTCGGCCGACGACGCG GCGTTCATGCTCGGCAACGCGGAATCGGTCGTGATCGTGCCGGGTTACGGCCTTGCCGTCGCCCGGGCGCAGCACGCGCT GAAGGAGCTGACCGACAAGCTGGTCGAGAAGGGCATCGACGTGAAGTACGCGATCCACCCGGTCGCGGGGCGGATGCCGG GCCACATGAACGTGCTGCTCGCGGAAGCGGAAGTGCCGTACGAGATCGTGCACGAGATGGAGGACATCAACGGCGAATTC GGCCAGGTGGACGTGGTGCTCGTGCTCGGCGCGAACGACGTCGTGAACCCGGCCGCGAAGAACGATCCGAAATCGCCGAT CGCGGGGATGCCGATCATCGAGGCGTACAAGGCGCGCACGGTGATCGTCAACAAGCGCTCGATGGCGGCCGGCTACGCGG GCCTCGACAACTACCTGTTCTACATGGACAAGACGATGATGGTGTTCGGCGATGCGAAGAAGGTCATCGAGGACATGGTG AAGGCCGTCGAATAA
Upstream 100 bases:
>100_bases CCGTCAACGTGTTCGGCGGCTTTCTCGTGACGAGGCGCATGCTCGAGATGTTCCGCAAGAAGGAGCCCAAGCGTATCGAG GGCAGCAAGGAGGGTGCGCG
Downstream 100 bases:
>100_bases CGCACGCCCCGGCTACGCGGTGCCCGCTTCGATGCGCGGGCGCAGCGCTCCCGGCAGGCCCGACCGGTACAAGAAGCCGG CCGGGCCTTTTTCATGGGGC
Product: NAD(P) transhydrogenase, beta subunit
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit beta; Proton-translocating transhydrogenase NADP(H)-binding component; Pyridine nucleotide transhydrogenase subunit beta; dIII [H]
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MSMNVVTLLYLVASVCFIQALKGLSNPKSARRGNLFGMVGMAIAILTTIALIVKQAAWLGANLPLGLALVLGALIVGGGV GAFVAARVEMTKMPELVAAMHSLIGLAAVCIAYAVVSEPEAFGLVPQDAVSSSFIPYGNRVELFIGTFVGAITFSGSVIA FGKLSGKYKFRLFQGAPVVYAGQHLINLMLAIAMLGFGILFFITQAWLPFIIMTAIAFVLGVLIIIPIGGADMPVVVSML NSYSGWAAAGIGFSLNNAMLIIAGSLVGSSGAILSYIMCHAMNRSFFNVILGGFGGEAAAGGAAGAQEQRPVKSGSADDA AFMLGNAESVVIVPGYGLAVARAQHALKELTDKLVEKGIDVKYAIHPVAGRMPGHMNVLLAEAEVPYEIVHEMEDINGEF GQVDVVLVLGANDVVNPAAKNDPKSPIAGMPIIEAYKARTVIVNKRSMAAGYAGLDNYLFYMDKTMMVFGDAKKVIEDMV KAVE
Sequences:
>Translated_484_residues MSMNVVTLLYLVASVCFIQALKGLSNPKSARRGNLFGMVGMAIAILTTIALIVKQAAWLGANLPLGLALVLGALIVGGGV GAFVAARVEMTKMPELVAAMHSLIGLAAVCIAYAVVSEPEAFGLVPQDAVSSSFIPYGNRVELFIGTFVGAITFSGSVIA FGKLSGKYKFRLFQGAPVVYAGQHLINLMLAIAMLGFGILFFITQAWLPFIIMTAIAFVLGVLIIIPIGGADMPVVVSML NSYSGWAAAGIGFSLNNAMLIIAGSLVGSSGAILSYIMCHAMNRSFFNVILGGFGGEAAAGGAAGAQEQRPVKSGSADDA AFMLGNAESVVIVPGYGLAVARAQHALKELTDKLVEKGIDVKYAIHPVAGRMPGHMNVLLAEAEVPYEIVHEMEDINGEF GQVDVVLVLGANDVVNPAAKNDPKSPIAGMPIIEAYKARTVIVNKRSMAAGYAGLDNYLFYMDKTMMVFGDAKKVIEDMV KAVE >Mature_483_residues SMNVVTLLYLVASVCFIQALKGLSNPKSARRGNLFGMVGMAIAILTTIALIVKQAAWLGANLPLGLALVLGALIVGGGVG AFVAARVEMTKMPELVAAMHSLIGLAAVCIAYAVVSEPEAFGLVPQDAVSSSFIPYGNRVELFIGTFVGAITFSGSVIAF GKLSGKYKFRLFQGAPVVYAGQHLINLMLAIAMLGFGILFFITQAWLPFIIMTAIAFVLGVLIIIPIGGADMPVVVSMLN SYSGWAAAGIGFSLNNAMLIIAGSLVGSSGAILSYIMCHAMNRSFFNVILGGFGGEAAAGGAAGAQEQRPVKSGSADDAA FMLGNAESVVIVPGYGLAVARAQHALKELTDKLVEKGIDVKYAIHPVAGRMPGHMNVLLAEAEVPYEIVHEMEDINGEFG QVDVVLVLGANDVVNPAAKNDPKSPIAGMPIIEAYKARTVIVNKRSMAAGYAGLDNYLFYMDKTMMVFGDAKKVIEDMVK AVE
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG1282
COG function: function code C; NAD/NADP transhydrogenase beta subunit
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNT beta subunit family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=493, Percent_Identity=45.4361054766734, Blast_Score=397, Evalue=1e-110, Organism=Homo sapiens, GI122939153, Length=493, Percent_Identity=45.4361054766734, Blast_Score=397, Evalue=1e-110, Organism=Escherichia coli, GI1787886, Length=488, Percent_Identity=49.7950819672131, Blast_Score=451, Evalue=1e-128, Organism=Caenorhabditis elegans, GI17550456, Length=481, Percent_Identity=42.8274428274428, Blast_Score=358, Evalue=4e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012136 - InterPro: IPR004003 [H]
Pfam domain/function: PF02233 PNTB [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 50704; Mature: 50572
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMNVVTLLYLVASVCFIQALKGLSNPKSARRGNLFGMVGMAIAILTTIALIVKQAAWLG CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC ANLPLGLALVLGALIVGGGVGAFVAARVEMTKMPELVAAMHSLIGLAAVCIAYAVVSEPE CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AFGLVPQDAVSSSFIPYGNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPVVY HCCCCCHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCEEEEEECCCEEEEEEEECCCEEE AGQHLINLMLAIAMLGFGILFFITQAWLPFIIMTAIAFVLGVLIIIPIGGADMPVVVSML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHH NSYSGWAAAGIGFSLNNAMLIIAGSLVGSSGAILSYIMCHAMNRSFFNVILGGFGGEAAA HCCCCCCHHCCCEECCCEEEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCC GGAAGAQEQRPVKSGSADDAAFMLGNAESVVIVPGYGLAVARAQHALKELTDKLVEKGID CCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC VKYAIHPVAGRMPGHMNVLLAEAEVPYEIVHEMEDINGEFGQVDVVLVLGANDVVNPAAK EEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCC NDPKSPIAGMPIIEAYKARTVIVNKRSMAAGYAGLDNYLFYMDKTMMVFGDAKKVIEDMV CCCCCCCCCCCHHHHHCCEEEEEECHHHHCCCCCHHHHHHHCCCCCEEECCHHHHHHHHH KAVE HHCC >Mature Secondary Structure SMNVVTLLYLVASVCFIQALKGLSNPKSARRGNLFGMVGMAIAILTTIALIVKQAAWLG CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC ANLPLGLALVLGALIVGGGVGAFVAARVEMTKMPELVAAMHSLIGLAAVCIAYAVVSEPE CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AFGLVPQDAVSSSFIPYGNRVELFIGTFVGAITFSGSVIAFGKLSGKYKFRLFQGAPVVY HCCCCCHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCEEEEEECCCEEEEEEEECCCEEE AGQHLINLMLAIAMLGFGILFFITQAWLPFIIMTAIAFVLGVLIIIPIGGADMPVVVSML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHH NSYSGWAAAGIGFSLNNAMLIIAGSLVGSSGAILSYIMCHAMNRSFFNVILGGFGGEAAA HCCCCCCHHCCCEECCCEEEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCC GGAAGAQEQRPVKSGSADDAAFMLGNAESVVIVPGYGLAVARAQHALKELTDKLVEKGID CCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC VKYAIHPVAGRMPGHMNVLLAEAEVPYEIVHEMEDINGEFGQVDVVLVLGANDVVNPAAK EEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCC NDPKSPIAGMPIIEAYKARTVIVNKRSMAAGYAGLDNYLFYMDKTMMVFGDAKKVIEDMV CCCCCCCCCCCHHHHHCCEEEEEECHHHHCCCCCHHHHHHHCCCCCEEECCHHHHHHHHH KAVE HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8075801 [H]