| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is pntAA [H]
Identifier: 116688723
GI number: 116688723
Start: 779896
End: 781035
Strand: Direct
Name: pntAA [H]
Synonym: Bcen2424_0700
Alternate gene names: 116688723
Gene position: 779896-781035 (Clockwise)
Preceding gene: 116688719
Following gene: 116688724
Centisome position: 22.39
GC content: 68.86
Gene sequence:
>1140_bases ATGCATATTGGAGTGCCTGCTGAAACGCGGGCCAACGAGGCGCGCGTGGCTGCGACGCCGGAAACCGTGAAGAAATACGC GGCGGCCGGCCATCGGGTCAGTATCGCGAAAGGGGCCGGCAGTGCAGCCAGCTATCCCGATGAAGCCTATGTGGCCGCCG GCGCAGAATTGACCGACCAGTCGGCCGCTTTCGCCGCCGACCTCGTGCTGAAGGTCCAGGCGCCCACCGACGCCGAATTG CCGTTGCTCAAGCGCGGCGCCGTGCTGGTTGGCATGCTCGAGCCGTTCAACGGCGAGCAGGCGGCGCAACTCGCCGCGGC CGGCGTGACCGGTTTCGCGCTCGAGGCCGCGCCGCGCACGACTCGCGCGCAGAGTCTCGACGTGCTGTCGTCGCAGGCGA ACATCGCCGGCTACAAGGCCGTGCTGGTGGCCGCGTCGCTGTATCCGCGCTTCATGCCGATGCTGATGACGGCCGCGGGC ACCGTGAAGGCGGCGCGCGTGCTGATTCTCGGCGCGGGCGTCGCGGGCCTGCAGGCGATCGCGACCGCGAAGCGGCTGGG CGCGGTGATCGAGGCGTCCGACGTGCGGCCGGCCGTGAAGGAACAGATCGAGTCGCTCGGTGCGAAATTCCTCGACGTGC CGTTCGAAACCGACGAAGAGCGCGAAGCCGCGCAGGGTGTCGGCGGCTATGCACGCCCGATGCCGCCGTCGTGGCTCGGC CGCCAGGCCGCGCTCGTGCACGAACGCGCGAAGCAGGCCGACATCGTGATCACCACCGCGCTGATTCCCGGCCGCCCGGC GCCGACGCTGATCTCGGTCGACACCGCGCAGTCGATGAAGCCCGGCTCGGTGCTCGTCGATCTCGCGGCCGGCCGCGGCC CGGAAATCGACGGCCGCAAGGGCGGCAACTGCCCGCTGACCGTCGCCGATCAGGTGATCGTGCACAACGGCGTGACGATC GCCGGCTACACGAACCTCGCGTCGATGGTCGCGTCGGACGCGTCGGCACTGTACGCACGCAACCTGCTCGACTTCCTGAA GCTGATCGTCACGAAGGAAGGCACGCTGAACATCGACCTGACCGACGACATCGTCGCCGCGACGCTGCTGTGCCGCGACG GCGAAGTCACGCGTAAATAA
Upstream 100 bases:
>100_bases GAAAGCCGTTGCTCGTGAGCCGGTAAGTCAGCCTGTCCGGCTCGTTGCGCAGTAAAGAACGCAAGAAAAGAAATACTGAC AATGACTGGAGGAACTGACG
Downstream 100 bases:
>100_bases CGGAGGAGACCATGGAAGTCATCAATCACACGGTGATCAACGTGATCATCTTCGTGCTGGCGGTGTACGTCGGCTACCAC GTCGTCTGGAACGTCACGCC
Product: NAD(P) transhydrogenase subunit alpha
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit alpha 1; Proton-translocating transhydrogenase component 1; Pyridine nucleotide transhydrogenase subunit alpha 1; dI [H]
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MHIGVPAETRANEARVAATPETVKKYAAAGHRVSIAKGAGSAASYPDEAYVAAGAELTDQSAAFAADLVLKVQAPTDAEL PLLKRGAVLVGMLEPFNGEQAAQLAAAGVTGFALEAAPRTTRAQSLDVLSSQANIAGYKAVLVAASLYPRFMPMLMTAAG TVKAARVLILGAGVAGLQAIATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPFETDEEREAAQGVGGYARPMPPSWLG RQAALVHERAKQADIVITTALIPGRPAPTLISVDTAQSMKPGSVLVDLAAGRGPEIDGRKGGNCPLTVADQVIVHNGVTI AGYTNLASMVASDASALYARNLLDFLKLIVTKEGTLNIDLTDDIVAATLLCRDGEVTRK
Sequences:
>Translated_379_residues MHIGVPAETRANEARVAATPETVKKYAAAGHRVSIAKGAGSAASYPDEAYVAAGAELTDQSAAFAADLVLKVQAPTDAEL PLLKRGAVLVGMLEPFNGEQAAQLAAAGVTGFALEAAPRTTRAQSLDVLSSQANIAGYKAVLVAASLYPRFMPMLMTAAG TVKAARVLILGAGVAGLQAIATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPFETDEEREAAQGVGGYARPMPPSWLG RQAALVHERAKQADIVITTALIPGRPAPTLISVDTAQSMKPGSVLVDLAAGRGPEIDGRKGGNCPLTVADQVIVHNGVTI AGYTNLASMVASDASALYARNLLDFLKLIVTKEGTLNIDLTDDIVAATLLCRDGEVTRK >Mature_379_residues MHIGVPAETRANEARVAATPETVKKYAAAGHRVSIAKGAGSAASYPDEAYVAAGAELTDQSAAFAADLVLKVQAPTDAEL PLLKRGAVLVGMLEPFNGEQAAQLAAAGVTGFALEAAPRTTRAQSLDVLSSQANIAGYKAVLVAASLYPRFMPMLMTAAG TVKAARVLILGAGVAGLQAIATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPFETDEEREAAQGVGGYARPMPPSWLG RQAALVHERAKQADIVITTALIPGRPAPTLISVDTAQSMKPGSVLVDLAAGRGPEIDGRKGGNCPLTVADQVIVHNGVTI AGYTNLASMVASDASALYARNLLDFLKLIVTKEGTLNIDLTDDIVAATLLCRDGEVTRK
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG3288
COG function: function code C; NAD/NADP transhydrogenase alpha subunit
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=391, Percent_Identity=39.1304347826087, Blast_Score=251, Evalue=7e-67, Organism=Homo sapiens, GI122939153, Length=391, Percent_Identity=39.1304347826087, Blast_Score=251, Evalue=7e-67, Organism=Escherichia coli, GI1787887, Length=380, Percent_Identity=44.7368421052632, Blast_Score=308, Evalue=4e-85, Organism=Caenorhabditis elegans, GI17550456, Length=379, Percent_Identity=41.4248021108179, Blast_Score=268, Evalue=3e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 39182; Mature: 39182
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIGVPAETRANEARVAATPETVKKYAAAGHRVSIAKGAGSAASYPDEAYVAAGAELTDQ CCCCCCCCCCCCCCEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEECCCCCCCC SAAFAADLVLKVQAPTDAELPLLKRGAVLVGMLEPFNGEQAAQLAAAGVTGFALEAAPRT HHHHEEEEEEEEECCCCCCCCHHHCCCEEEEEECCCCCHHHHHHHHCCCCCEEEECCCCC TRAQSLDVLSSQANIAGYKAVLVAASLYPRFMPMLMTAAGTVKAARVLILGAGVAGLQAI CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEEEEECCHHHHHHH ATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPFETDEEREAAQGVGGYARPMPPSWLG HHHHHHHHEEECCCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHCCCCCCCCCCHHHHC RQAALVHERAKQADIVITTALIPGRPAPTLISVDTAQSMKPGSVLVDLAAGRGPEIDGRK HHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCC GGNCPLTVADQVIVHNGVTIAGYTNLASMVASDASALYARNLLDFLKLIVTKEGTLNIDL CCCCCEEEECEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC TDDIVAATLLCRDGEVTRK CHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MHIGVPAETRANEARVAATPETVKKYAAAGHRVSIAKGAGSAASYPDEAYVAAGAELTDQ CCCCCCCCCCCCCCEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEECCCCCCCC SAAFAADLVLKVQAPTDAELPLLKRGAVLVGMLEPFNGEQAAQLAAAGVTGFALEAAPRT HHHHEEEEEEEEECCCCCCCCHHHCCCEEEEEECCCCCHHHHHHHHCCCCCEEEECCCCC TRAQSLDVLSSQANIAGYKAVLVAASLYPRFMPMLMTAAGTVKAARVLILGAGVAGLQAI CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEEEEECCHHHHHHH ATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPFETDEEREAAQGVGGYARPMPPSWLG HHHHHHHHEEECCCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHCCCCCCCCCCHHHHC RQAALVHERAKQADIVITTALIPGRPAPTLISVDTAQSMKPGSVLVDLAAGRGPEIDGRK HHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCC GGNCPLTVADQVIVHNGVTIAGYTNLASMVASDASALYARNLLDFLKLIVTKEGTLNIDL CCCCCEEEECEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC TDDIVAATLLCRDGEVTRK CHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8075801 [H]