| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yibF [H]
Identifier: 116688719
GI number: 116688719
Start: 775470
End: 776087
Strand: Direct
Name: yibF [H]
Synonym: Bcen2424_0696
Alternate gene names: 116688719
Gene position: 775470-776087 (Clockwise)
Preceding gene: 116688708
Following gene: 116688723
Centisome position: 22.26
GC content: 63.92
Gene sequence:
>618_bases ATGATGAAATTAATCGGTTCGCTCAGCAGCCCGTACGTCCGAAAGGCGCGGATCGTGCTTGCTGAAAAGAAGATCGACTA CAAGCTGGAGCTCGAGGACGTGTGGGCGCCGGAGACGGATATTCATGCATCGAATCCGCTCGGCAAGGTCCCGTGCCTCG TGATGGAGGATGGTGCTGCGGTGTTCGATTCCCGCGTGATCTGCGAATACGTCGATACGCTGTCGCCGGTCGGCAAGCTG ATTCCGCCGTCGGGCCGCGAGCGCGTCGAAGTGCGCTGCTGGGAGGCACTGGGCGACGGCGTGCTCGACGCAGCCGTCGC GATCCGTCTCGAACACACGATGCGCGACGAGGCGCAGCGCAGCGCGAGCTGGATCGCGCGTCAGCAACGCAAGATCGACG ACGCGCTCGTCGCGATGTCGCAGGGTCTCGGCGGCAAGGCGTGGTGCGTCGGCAATCATTACACGCTCGCCGACATCGCA CTCGGCTGCGCGCTCGGCTACCTCGATTTCCGGATGCCCGAGCTCAACTGGCGCGATCGCCACCCGAACCTCGACAAGCA CTTCGTGAAGCTGCTGCAGCGGCAATCGTTCGCCGATACGCTGCCGCCGCAGAGCTGA
Upstream 100 bases:
>100_bases AAACCATCCACAGGCCGGACGGGCGATTTTCTACCCGGCTGCACCGGCCGGTTATGATCGACGACAACGTATACTCTCGG CAGTTCCCTTGAAAAGGCAG
Downstream 100 bases:
>100_bases GCCGCGGCCCGATCCTCACGCATTCGGCAGACGAAAGAAAAGCGCCCCGCGGGGCGCTTTTCTTTTTGCGGCGCAGGCCG CCCGCTGCCGGAGCGGGCCG
Product: glutathione S-transferase domain-containing protein
Products: HX; R-S-glutathione
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MMKLIGSLSSPYVRKARIVLAEKKIDYKLELEDVWAPETDIHASNPLGKVPCLVMEDGAAVFDSRVICEYVDTLSPVGKL IPPSGRERVEVRCWEALGDGVLDAAVAIRLEHTMRDEAQRSASWIARQQRKIDDALVAMSQGLGGKAWCVGNHYTLADIA LGCALGYLDFRMPELNWRDRHPNLDKHFVKLLQRQSFADTLPPQS
Sequences:
>Translated_205_residues MMKLIGSLSSPYVRKARIVLAEKKIDYKLELEDVWAPETDIHASNPLGKVPCLVMEDGAAVFDSRVICEYVDTLSPVGKL IPPSGRERVEVRCWEALGDGVLDAAVAIRLEHTMRDEAQRSASWIARQQRKIDDALVAMSQGLGGKAWCVGNHYTLADIA LGCALGYLDFRMPELNWRDRHPNLDKHFVKLLQRQSFADTLPPQS >Mature_205_residues MMKLIGSLSSPYVRKARIVLAEKKIDYKLELEDVWAPETDIHASNPLGKVPCLVMEDGAAVFDSRVICEYVDTLSPVGKL IPPSGRERVEVRCWEALGDGVLDAAVAIRLEHTMRDEAQRSASWIARQQRKIDDALVAMSQGLGGKAWCVGNHYTLADIA LGCALGYLDFRMPELNWRDRHPNLDKHFVKLLQRQSFADTLPPQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1790018, Length=204, Percent_Identity=37.7450980392157, Blast_Score=132, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: 2.5.1.18
Molecular weight: Translated: 22942; Mature: 22942
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKLIGSLSSPYVRKARIVLAEKKIDYKLELEDVWAPETDIHASNPLGKVPCLVMEDGAA CCCCCCCCCCCHHHHHHEEEEECCCCEEEEHHHCCCCCCCCCCCCCCCCCCEEEEECCCH VFDSRVICEYVDTLSPVGKLIPPSGRERVEVRCWEALGDGVLDAAVAIRLEHTMRDEAQR HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH SASWIARQQRKIDDALVAMSQGLGGKAWCVGNHYTLADIALGCALGYLDFRMPELNWRDR HHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCC HPNLDKHFVKLLQRQSFADTLPPQS CCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MMKLIGSLSSPYVRKARIVLAEKKIDYKLELEDVWAPETDIHASNPLGKVPCLVMEDGAA CCCCCCCCCCCHHHHHHEEEEECCCCEEEEHHHCCCCCCCCCCCCCCCCCCEEEEECCCH VFDSRVICEYVDTLSPVGKLIPPSGRERVEVRCWEALGDGVLDAAVAIRLEHTMRDEAQR HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH SASWIARQQRKIDDALVAMSQGLGGKAWCVGNHYTLADIALGCALGYLDFRMPELNWRDR HHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCC HPNLDKHFVKLLQRQSFADTLPPQS CCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: RX; glutathione
Specific reaction: RX + glutathione = HX + R-S-glutathione
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]