| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is allA [H]
Identifier: 116688671
GI number: 116688671
Start: 721990
End: 722523
Strand: Direct
Name: allA [H]
Synonym: Bcen2424_0648
Alternate gene names: 116688671
Gene position: 721990-722523 (Clockwise)
Preceding gene: 116688670
Following gene: 116688673
Centisome position: 20.72
GC content: 70.6
Gene sequence:
>534_bases ATGAGCGGAACTCCGATCCTGCGCGTCGAGCGCCTGACCCGCGAAGCGTTCGCGCCGTTCGGCGACGTGATCGCGCTCGA AGGCGCGCGGCATTTCCCGATCAACGGCGGCACGACCGAGCGCTTTCACGATCTCGCGACGATCGACGTCTGCGCGGACG GCGGCCGGCCGCTCGTCAGCGTGTTTCGCGCGCAGCCGCGCGCGTTGCCGGTCGCGGTCACGCTGATGGAGCGTCATCCG CACGGCAGCCAGGCGTTCATCCCGCTCGCGGCGGTGTCGCGCTACGCGATCGTCGTCGCGCCGGCCGGCGAATTCCGGCC CGACGCGATGCGCGCGTTCCTGGCCGAGGGCTGGCAGGGCGTCAATTATGCGAAGGGCGTCTGGCACCATCCGCTGCTCG CGCTCGACGCGGTCAGCGATTTCGTGATCGTCGATCGCGGCGGGCCGCAGCCGAACTGCGACGAGATCCCGCTGGAACGC GCGTGGGCGCTCGATTTCGAGCCGGCCTGCGCGGGCGCCGAAGGGCTTTCGTAA
Upstream 100 bases:
>100_bases CGCTCGGCCCCGTCACGCACGTGCGCTTCAACATCTTCCCGGACGGCGGCGTGTCGCGCCTGCGTCTGTGGGGCGAGCCG GCTTGAAGGAGGGCAGCGGC
Downstream 100 bases:
>100_bases GCATGTCGGGCGCGCGGCAGGCGCGCCGAAAAAGCACACGGCCCGGGCGGCGAGATGCCGGCCGGGCCGTGCCGCGTGTA CGGGTGGCGCGCTTCAGTGC
Product: ureidoglycolate hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSGTPILRVERLTREAFAPFGDVIALEGARHFPINGGTTERFHDLATIDVCADGGRPLVSVFRAQPRALPVAVTLMERHP HGSQAFIPLAAVSRYAIVVAPAGEFRPDAMRAFLAEGWQGVNYAKGVWHHPLLALDAVSDFVIVDRGGPQPNCDEIPLER AWALDFEPACAGAEGLS
Sequences:
>Translated_177_residues MSGTPILRVERLTREAFAPFGDVIALEGARHFPINGGTTERFHDLATIDVCADGGRPLVSVFRAQPRALPVAVTLMERHP HGSQAFIPLAAVSRYAIVVAPAGEFRPDAMRAFLAEGWQGVNYAKGVWHHPLLALDAVSDFVIVDRGGPQPNCDEIPLER AWALDFEPACAGAEGLS >Mature_176_residues SGTPILRVERLTREAFAPFGDVIALEGARHFPINGGTTERFHDLATIDVCADGGRPLVSVFRAQPRALPVAVTLMERHPH GSQAFIPLAAVSRYAIVVAPAGEFRPDAMRAFLAEGWQGVNYAKGVWHHPLLALDAVSDFVIVDRGGPQPNCDEIPLERA WALDFEPACAGAEGLS
Specific function: Involved In The Anaerobic Utilization Of Allantoin. Reinforces The Induction Of Genes Involved In The Degradation Of Allantoin And Glyoxylate By Producing Glyoxylate. [C]
COG id: COG3194
COG function: function code F; Ureidoglycolate hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureidoglycolate hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786714, Length=150, Percent_Identity=46, Blast_Score=134, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR007247 [H]
Pfam domain/function: PF04115 Ureidogly_hydro [H]
EC number: =3.5.3.19 [H]
Molecular weight: Translated: 19078; Mature: 18947
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTPILRVERLTREAFAPFGDVIALEGARHFPINGGTTERFHDLATIDVCADGGRPLVS CCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHEEEEEEECCCCCHHHH VFRAQPRALPVAVTLMERHPHGSQAFIPLAAVSRYAIVVAPAGEFRPDAMRAFLAEGWQG HHHCCCCCCEEEEEEEECCCCCCCEEEHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCC VNYAKGVWHHPLLALDAVSDFVIVDRGGPQPNCDEIPLERAWALDFEPACAGAEGLS CCCCCCCCCCCHHEEECCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC >Mature Secondary Structure SGTPILRVERLTREAFAPFGDVIALEGARHFPINGGTTERFHDLATIDVCADGGRPLVS CCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHEEEEEEECCCCCHHHH VFRAQPRALPVAVTLMERHPHGSQAFIPLAAVSRYAIVVAPAGEFRPDAMRAFLAEGWQG HHHCCCCCCEEEEEEEECCCCCCCEEEHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCC VNYAKGVWHHPLLALDAVSDFVIVDRGGPQPNCDEIPLERAWALDFEPACAGAEGLS CCCCCCCCCCCHHEEECCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11320133 [H]