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The map label for this gene is omlA [H]

Identifier: 116688673

GI number: 116688673

Start: 723187

End: 723993

Strand: Direct

Name: omlA [H]

Synonym: Bcen2424_0650

Alternate gene names: 116688673

Gene position: 723187-723993 (Clockwise)

Preceding gene: 116688671

Following gene: 116688674

Centisome position: 20.76

GC content: 71.75

Gene sequence:

>807_bases
ATGCGGAGTGCCATCATCGCTGCCGCCGCCGTTGTCGCGCTGGCGGGTTGTTCGTCGTACGACAGCGTGACGCAGCGCAT
TGCGCAGAGCATCACGCCGTATCGGATCACCGTCGTGCAGGGCAACTTCGTGTCGCAGGAGAAAGCCGCACAGTTGCAGG
CCGGCATGACGCGCGAGCAGGTCCGCGCGCTGCTCGGCACGCCGCTGCTGGCGGACATGTTCCACGCGGATCGCTGGGAT
TACCTCTTCTACTTCAAGCGCGGCTCGACGTCGATCGTCCAGCAGCGTGACCTCGTGGTCAACTTCTCCGGTGATCGCGT
CGCGAGCTGGACCGGCGCCGACAACCTGCCGTCCGAACTCGACCTGCTGGCCGACATCGACGGCGACCGCGGCGGCAAGA
AGGCGAAGGCCGCTGCCGCGGCGAAGAAGGCTTCCGAAGCCGCTGCGGCCGCGAGCGCCGCAAGCGCCGCGCAGGCTGCC
GCTGCCGCGAGCCCGGCCACGGTGCCGGCGTCCGGCGCGGTGGTCGACCAGGATGCGAACGCCCAGGCGGCGCGCGCGGC
GAACCGCGCGACCAACCAGGTGTCGGGGCAGGGTTCGGGTTCGCGCCGGTTCACGCCGGCCGCGCAGGCCTCGGGCGGCG
CGCCGGTGCCGGGCGGGCAGCCGCCGGGCGCCGCGCCGGCGATCCAGCCGCAGTTCCAGTTCCATCGTCCGCCGCAGCCG
AACGTGTCGAACGAAGCGTCGCCGCCGGTCGGCCCGCAAGGCTCGGACAACCTGCAGAACCAGCCGCTCACCGCACCGGC
GCAGTAA

Upstream 100 bases:

>100_bases
CCGGCTTTTCGCCGTTCCAGATATACGCGCGGCCTGCACGCGGGCCAGCACGGTGAAGGAAATGATCCCAGAATCGCTTT
CGCACTTTCAGAGGAGTCGC

Downstream 100 bases:

>100_bases
GCGGCCGGCGTGCGGAAACGGGGCGGCATGCGCCGCCCGCCTTTAGACCTGTCGTGTAGAAAGCCATGAAGATTGCGATT
GCCGGCGCATCGGGCCGAAT

Product: SmpA/OmlA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MRSAIIAAAAVVALAGCSSYDSVTQRIAQSITPYRITVVQGNFVSQEKAAQLQAGMTREQVRALLGTPLLADMFHADRWD
YLFYFKRGSTSIVQQRDLVVNFSGDRVASWTGADNLPSELDLLADIDGDRGGKKAKAAAAAKKASEAAAAASAASAAQAA
AAASPATVPASGAVVDQDANAQAARAANRATNQVSGQGSGSRRFTPAAQASGGAPVPGGQPPGAAPAIQPQFQFHRPPQP
NVSNEASPPVGPQGSDNLQNQPLTAPAQ

Sequences:

>Translated_268_residues
MRSAIIAAAAVVALAGCSSYDSVTQRIAQSITPYRITVVQGNFVSQEKAAQLQAGMTREQVRALLGTPLLADMFHADRWD
YLFYFKRGSTSIVQQRDLVVNFSGDRVASWTGADNLPSELDLLADIDGDRGGKKAKAAAAAKKASEAAAAASAASAAQAA
AAASPATVPASGAVVDQDANAQAARAANRATNQVSGQGSGSRRFTPAAQASGGAPVPGGQPPGAAPAIQPQFQFHRPPQP
NVSNEASPPVGPQGSDNLQNQPLTAPAQ
>Mature_268_residues
MRSAIIAAAAVVALAGCSSYDSVTQRIAQSITPYRITVVQGNFVSQEKAAQLQAGMTREQVRALLGTPLLADMFHADRWD
YLFYFKRGSTSIVQQRDLVVNFSGDRVASWTGADNLPSELDLLADIDGDRGGKKAKAAAAAKKASEAAAAASAASAAQAA
AAASPATVPASGAVVDQDANAQAARAANRATNQVSGQGSGSRRFTPAAQASGGAPVPGGQPPGAAPAIQPQFQFHRPPQP
NVSNEASPPVGPQGSDNLQNQPLTAPAQ

Specific function: May have a structural role in maintaining the cell envelope integrity [H]

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smpA/omlA family [H]

Homologues:

Organism=Escherichia coli, GI87082138, Length=120, Percent_Identity=35, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007450 [H]

Pfam domain/function: PF04355 SmpA_OmlA [H]

EC number: NA

Molecular weight: Translated: 27357; Mature: 27357

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSAIIAAAAVVALAGCSSYDSVTQRIAQSITPYRITVVQGNFVSQEKAAQLQAGMTREQ
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCHHH
VRALLGTPLLADMFHADRWDYLFYFKRGSTSIVQQRDLVVNFSGDRVASWTGADNLPSEL
HHHHHCCHHHHHHHHCCCCCEEEEEECCCCHHEECCCEEEEECCCEEEECCCCCCCCHHH
DLLADIDGDRGGKKAKAAAAAKKASEAAAAASAASAAQAAAAASPATVPASGAVVDQDAN
HHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCC
AQAARAANRATNQVSGQGSGSRRFTPAAQASGGAPVPGGQPPGAAPAIQPQFQFHRPPQP
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NVSNEASPPVGPQGSDNLQNQPLTAPAQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRSAIIAAAAVVALAGCSSYDSVTQRIAQSITPYRITVVQGNFVSQEKAAQLQAGMTREQ
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCHHH
VRALLGTPLLADMFHADRWDYLFYFKRGSTSIVQQRDLVVNFSGDRVASWTGADNLPSEL
HHHHHCCHHHHHHHHCCCCCEEEEEECCCCHHEECCCEEEEECCCEEEECCCCCCCCHHH
DLLADIDGDRGGKKAKAAAAAKKASEAAAAASAASAAQAAAAASPATVPASGAVVDQDAN
HHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCC
AQAARAANRATNQVSGQGSGSRRFTPAAQASGGAPVPGGQPPGAAPAIQPQFQFHRPPQP
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NVSNEASPPVGPQGSDNLQNQPLTAPAQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9973334 [H]