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The map label for this gene is yphB [H]

Identifier: 116688648

GI number: 116688648

Start: 697075

End: 698136

Strand: Direct

Name: yphB [H]

Synonym: Bcen2424_0625

Alternate gene names: 116688648

Gene position: 697075-698136 (Clockwise)

Preceding gene: 116688647

Following gene: 116688649

Centisome position: 20.01

GC content: 73.54

Gene sequence:

>1062_bases
ATGACGGCCACGTCCTCGCGCGCATCGTCGTCCACCAGCCAGTCGCGCCGCGCGCGCCTGGCCGCCGCCGCCCAGCCGGT
CAGCCCCGGCCCGCAGACGGCCGTGTTCGCGCAGGGCGTCGGCGCCGCGCATGCGGCGGCCGTCACGTTGTCGAACGCGT
CGCTGCGGCTCGACGTGCTGCCGCACCTCGGCGGCGGCATCGCGCGCTTCGACTGGCGCGGCGAGAACGGCGCGCTGGTG
CCGGTGTTCCGCCGTTGCGAGCACCCGGAGACGGCGACGGACCCGAACGAGCTCGCGTGCTATCCGCTGCTGCCGTACTC
GAACCGGATCGGCGACGGGCGCTTCGAATGCGACGGGCGCAAGGTCGCGGTGCCGCGCAACCGCCGCGACGAGCCGCTGC
CGATCCACGGCGACGGCTGGCTCGCGCGGTGGCAGGTGGACGATGCGACCGACACGTCGCTGCAACTGTCGCTCGACCGT
ACCGCCGGCGCGCCGTATGCGTTCCGCGCGATCCAGTCGTTCGAACTCGACGACGCGACGCTGTCGATCGCGCTGACGAT
CGAGAACGCGGGGCGCACGCGGCTGCCGTTCGGGCTCGGCGTGCATCCGTTTCTCGTGCGCGATGCGGTGACCGAGCTGG
CCGCGGCGGCGGGCGGCCTGTGGCTGTCGGGCGCCGATTTCCTGCCGGTGCGGCACGTGAGCGTGCCGCCGGCCTGGCAG
TTCGGCGTCGCGTATCCGCTGCCGGCCACGCTCGTCAATCACGCGTTCACCGGCTGGGGCGGCCACGCGACGGTGAGCTG
GCCGCGCCGCCGGCTGTTGCTGACCGTCGCGGCCGACGCTGACGCGTACGTGCTCTATACACCGCCGGGCGAGGATTTCT
TCTGCTTCGAGCCGGTCGATCATCCGATCAATGCGGTGAACCTGCCGGGCGGCGCGGCCGCGCACGGGATGACGCTGCTC
GCGCCCGGCGAGCGGCTCACGCGGCGCTTCGCGTTCACCGTCGAGCGCGCCGATGCGCGCAGCAATGCCACGACCCGCGA
GGGAGCCCGGCGACGCGGGTAA

Upstream 100 bases:

>100_bases
AGCCGGATGATCACCGCGCAGGACGTGATCGTCGACGGCGGCTGGGCCTGACCGCTCGCACGACCTGCATCGTTTCTTCG
ACGAAGGAAAGGAGCTCACC

Downstream 100 bases:

>100_bases
AATACGCGGTCTACCAACGGTTTGCCGCGAGTACCCGCCATGTCTTCCCCGCTTACTTTCATTGAATCGCTGCGCGCCGC
GTGGCAGCGCACGAATTCGC

Product: aldose 1-epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MTATSSRASSSTSQSRRARLAAAAQPVSPGPQTAVFAQGVGAAHAAAVTLSNASLRLDVLPHLGGGIARFDWRGENGALV
PVFRRCEHPETATDPNELACYPLLPYSNRIGDGRFECDGRKVAVPRNRRDEPLPIHGDGWLARWQVDDATDTSLQLSLDR
TAGAPYAFRAIQSFELDDATLSIALTIENAGRTRLPFGLGVHPFLVRDAVTELAAAAGGLWLSGADFLPVRHVSVPPAWQ
FGVAYPLPATLVNHAFTGWGGHATVSWPRRRLLLTVAADADAYVLYTPPGEDFFCFEPVDHPINAVNLPGGAAAHGMTLL
APGERLTRRFAFTVERADARSNATTREGARRRG

Sequences:

>Translated_353_residues
MTATSSRASSSTSQSRRARLAAAAQPVSPGPQTAVFAQGVGAAHAAAVTLSNASLRLDVLPHLGGGIARFDWRGENGALV
PVFRRCEHPETATDPNELACYPLLPYSNRIGDGRFECDGRKVAVPRNRRDEPLPIHGDGWLARWQVDDATDTSLQLSLDR
TAGAPYAFRAIQSFELDDATLSIALTIENAGRTRLPFGLGVHPFLVRDAVTELAAAAGGLWLSGADFLPVRHVSVPPAWQ
FGVAYPLPATLVNHAFTGWGGHATVSWPRRRLLLTVAADADAYVLYTPPGEDFFCFEPVDHPINAVNLPGGAAAHGMTLL
APGERLTRRFAFTVERADARSNATTREGARRRG
>Mature_352_residues
TATSSRASSSTSQSRRARLAAAAQPVSPGPQTAVFAQGVGAAHAAAVTLSNASLRLDVLPHLGGGIARFDWRGENGALVP
VFRRCEHPETATDPNELACYPLLPYSNRIGDGRFECDGRKVAVPRNRRDEPLPIHGDGWLARWQVDDATDTSLQLSLDRT
AGAPYAFRAIQSFELDDATLSIALTIENAGRTRLPFGLGVHPFLVRDAVTELAAAAGGLWLSGADFLPVRHVSVPPAWQF
GVAYPLPATLVNHAFTGWGGHATVSWPRRRLLLTVAADADAYVLYTPPGEDFFCFEPVDHPINAVNLPGGAAAHGMTLLA
PGERLTRRFAFTVERADARSNATTREGARRRG

Specific function: Unknown

COG id: COG2017

COG function: function code G; Galactose mutarotase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788894, Length=297, Percent_Identity=32.6599326599327, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1790311, Length=222, Percent_Identity=26.5765765765766, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008183
- InterPro:   IPR011013
- InterPro:   IPR014718 [H]

Pfam domain/function: PF01263 Aldose_epim [H]

EC number: NA

Molecular weight: Translated: 37858; Mature: 37727

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATSSRASSSTSQSRRARLAAAAQPVSPGPQTAVFAQGVGAAHAAAVTLSNASLRLDVL
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEECCCEEEEEEC
PHLGGGIARFDWRGENGALVPVFRRCEHPETATDPNELACYPLLPYSNRIGDGRFECDGR
CCCCCCEEEEEEECCCCCEEHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCC
KVAVPRNRRDEPLPIHGDGWLARWQVDDATDTSLQLSLDRTAGAPYAFRAIQSFELDDAT
EEECCCCCCCCCCEECCCCEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCE
LSIALTIENAGRTRLPFGLGVHPFLVRDAVTELAAAAGGLWLSGADFLPVRHVSVPPAWQ
EEEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCEEEECCCCCCCC
FGVAYPLPATLVNHAFTGWGGHATVSWPRRRLLLTVAADADAYVLYTPPGEDFFCFEPVD
CCCCCCCHHHHHHHCCCCCCCCEEECCCCEEEEEEEECCCCEEEEECCCCCCEEEECCCC
HPINAVNLPGGAAAHGMTLLAPGERLTRRFAFTVERADARSNATTREGARRRG
CCCCEEECCCCCHHCCEEEEECCHHHHHEEEEEEEECCCCCCCCCHHHHHCCC
>Mature Secondary Structure 
TATSSRASSSTSQSRRARLAAAAQPVSPGPQTAVFAQGVGAAHAAAVTLSNASLRLDVL
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEECCCEEEEEEC
PHLGGGIARFDWRGENGALVPVFRRCEHPETATDPNELACYPLLPYSNRIGDGRFECDGR
CCCCCCEEEEEEECCCCCEEHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCC
KVAVPRNRRDEPLPIHGDGWLARWQVDDATDTSLQLSLDRTAGAPYAFRAIQSFELDDAT
EEECCCCCCCCCCEECCCCEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCE
LSIALTIENAGRTRLPFGLGVHPFLVRDAVTELAAAAGGLWLSGADFLPVRHVSVPPAWQ
EEEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCEEEECCCCCCCC
FGVAYPLPATLVNHAFTGWGGHATVSWPRRRLLLTVAADADAYVLYTPPGEDFFCFEPVD
CCCCCCCHHHHHHHCCCCCCCCEEECCCCEEEEEEEECCCCEEEEECCCCCCEEEECCCC
HPINAVNLPGGAAAHGMTLLAPGERLTRRFAFTVERADARSNATTREGARRRG
CCCCEEECCCCCHHCCEEEEECCHHHHHEEEEEEEECCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]