| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688621
Identifier: 116688621
GI number: 116688621
Start: 670360
End: 671007
Strand: Direct
Name: 116688621
Synonym: Bcen2424_0598
Alternate gene names: NA
Gene position: 670360-671007 (Clockwise)
Preceding gene: 116688620
Following gene: 116688631
Centisome position: 19.24
GC content: 62.96
Gene sequence:
>648_bases ATGGCTACTGCCAAGAAGAAACCGGCTGCTAAGAAGGTTGCTGCCAAGAAGACCGTTGCGAAGAAGGCTGCCGCTCCGGC GAAGAAGGCCGCGGTGAAGAAGGTTGCTGCGAAGAAGGTCGCGGTGAAGAAGGTTGCCGCGAAGAAGGCAGCACCGGCGA AGAAGGCCGCTGCAAAGAAGGTCGCAGCCAAGAAGGTCGCAACGAAGAAGGTTGCAGCCAAGAAGGTCGCAGCGAAGAAA GTCGCGGTGAAGAAGGTTGCTGCAAAGAAGGCAGCACCGGCTAAGAAGGCCGCCGCGAAGAAGGTTGCAGCCAAGAAAGT CGCAGTGAAGAAGGTTGCTGCGAAGAAGGCCGCACCGGCGAAGAAGGCTGCTGCCAAGAAGGCTGCGCCGGCGAAGAAGG CTGCTGCGAAGAAGGCCGCGCCTGCGAAGAAGGCCGCTGCGAAGAAGGCCGCGCCCGCCAAGAAGGCTGCCCCTGCGAAG AAGGCTGCCGCACCGGCGAAGAAGGCTGCTGCTCCGAAGAAGGCCGTCGTGAAGAAGGCTGCGCCGGCAACGACCGCGTC GACCGCATCGGTTGCGCCGGCATCGGGCGTGAAGACCGCGCTCAACCCGGCAGCAGCATGGCCGTTCCCGACCGGCAGCC GTCCGTAA
Upstream 100 bases:
>100_bases CCGCTTCGAAGCGCACGTCCTGAACAGCGTCCGCGGGAAGCGGGTTTTGACGAAGGGTGTAGTTTGAACTGACTCTCATC TGAACCTGAAGGAGAACAAC
Downstream 100 bases:
>100_bases TCGCGGCTGAGCAGCATCACCCGGACACTCACGTGGTGTCCGTGGGTTGAGTAGCGCTACTCAATCAGTCCCGCCATCTG GCTCAGGTGGCGGGATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MATAKKKPAAKKVAAKKTVAKKAAAPAKKAAVKKVAAKKVAVKKVAAKKAAPAKKAAAKKVAAKKVATKKVAAKKVAAKK VAVKKVAAKKAAPAKKAAAKKVAAKKVAVKKVAAKKAAPAKKAAAKKAAPAKKAAAKKAAPAKKAAAKKAAPAKKAAPAK KAAAPAKKAAAPKKAVVKKAAPATTASTASVAPASGVKTALNPAAAWPFPTGSRP
Sequences:
>Translated_215_residues MATAKKKPAAKKVAAKKTVAKKAAAPAKKAAVKKVAAKKVAVKKVAAKKAAPAKKAAAKKVAAKKVATKKVAAKKVAAKK VAVKKVAAKKAAPAKKAAAKKVAAKKVAVKKVAAKKAAPAKKAAAKKAAPAKKAAAKKAAPAKKAAAKKAAPAKKAAPAK KAAAPAKKAAAPKKAVVKKAAPATTASTASVAPASGVKTALNPAAAWPFPTGSRP >Mature_214_residues ATAKKKPAAKKVAAKKTVAKKAAAPAKKAAVKKVAAKKVAVKKVAAKKAAPAKKAAAKKVAAKKVATKKVAAKKVAAKKV AVKKVAAKKAAPAKKAAAKKVAAKKVAVKKVAAKKAAPAKKAAAKKAAPAKKAAAKKAAPAKKAAAKKAAPAKKAAPAKK AAAPAKKAAAPKKAVVKKAAPATTASTASVAPASGVKTALNPAAAWPFPTGSRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20940; Mature: 20809
Theoretical pI: Translated: 12.80; Mature: 12.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATAKKKPAAKKVAAKKTVAKKAAAPAKKAAVKKVAAKKVAVKKVAAKKAAPAKKAAAKK CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH VAAKKVATKKVAAKKVAAKKVAVKKVAAKKAAPAKKAAAKKVAAKKVAVKKVAAKKAAPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH KKAAAKKAAPAKKAAAKKAAPAKKAAAKKAAPAKKAAPAKKAAAPAKKAAAPKKAVVKKA HHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCHHHCCCHHHHHCCHHHHCCCHHHHHHHH APATTASTASVAPASGVKTALNPAAAWPFPTGSRP CCCCCCCCCCCCCCCCHHHHHCCHHCCCCCCCCCC >Mature Secondary Structure ATAKKKPAAKKVAAKKTVAKKAAAPAKKAAVKKVAAKKVAVKKVAAKKAAPAKKAAAKK CCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH VAAKKVATKKVAAKKVAAKKVAVKKVAAKKAAPAKKAAAKKVAAKKVAVKKVAAKKAAPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH KKAAAKKAAPAKKAAAKKAAPAKKAAAKKAAPAKKAAPAKKAAAPAKKAAAPKKAVVKKA HHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCHHHCCCHHHHHCCHHHHCCCHHHHHHHH APATTASTASVAPASGVKTALNPAAAWPFPTGSRP CCCCCCCCCCCCCCCCHHHHHCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA