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The map label for this gene is rpe [H]

Identifier: 116688560

GI number: 116688560

Start: 596489

End: 597175

Strand: Reverse

Name: rpe [H]

Synonym: Bcen2424_0536

Alternate gene names: 116688560

Gene position: 597175-596489 (Counterclockwise)

Preceding gene: 116688563

Following gene: 116688559

Centisome position: 17.14

GC content: 66.52

Gene sequence:

>687_bases
ATGACTCAATTCCGCATCGCCCCCAGCATCCTGTCGGCCGACTTTGCACGGCTCGGCGAAGAAGTCCGCAACGTGGTCGC
CGCCGGCGCCGACTGGATTCACTTCGACGTGATGGACAACCATTATGTGCCGAACCTGACGATCGGCCCGCTCGTCTGCG
AGGCGATCCGCCCGCACGTGCAGGTGCCGATCGACGTGCACCTGATGGTGCGTCCGGTCGACCGGATCGTGCCCGATTTC
GCGAAGGCCGGCGCGAACCTGATCAGCTTCCACCCGGAAGGCTCCGATCACATCGACCGCACGCTGTCGCTGATCCGCGA
CCACGGCTGCAAGGCCGGTCTGGTGTTCAATCCGGCCACGCCGCTGAACTACCTCGACCACGTGATGGATCGCCTCGACT
TCGTGCTGCTGATGTCGGTGAACCCCGGCTTCGGCGGCCAGTCGTTCATTCCGGAGACGCTGAACAAGCTGCGCGAGGCG
CGCGCCCGCATCGACGCGTACACCGAGCGCACCGGCCGCGAGATCCTGCTCGAAGTCGACGGCGGCGTGAAGGCCGACAA
CATCGCGGAAATCGCGGCGGCCGGCGCCGACGCGTTCGTCGCGGGCTCGGCGATCTTCGGCAAGCCCGACTACCGCAAGG
TGATCGACGAGATGCGCGCGGCGCTCGCGACCGTCGAACGGAGCTGA

Upstream 100 bases:

>100_bases
TATGCGCAATCGGGCCGCAACCGCACGGCCTGCCGCCGCGCACCGGGTCGCCGGACGGTAGAATGACGGTTTTGCGCCGC
AACGTCCCCGCTCCCCTGCC

Downstream 100 bases:

>100_bases
CGCCGTGGCCGACTCGTCGTTCGCCGGCCGCGCGCCGGCCGGGGCCGCCACGGACGCGGCCCCGATCCGCTTCGCCGCGC
CGCGCATCGATGCGGCGCTG

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTQFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQVPIDVHLMVRPVDRIVPDF
AKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPATPLNYLDHVMDRLDFVLLMSVNPGFGGQSFIPETLNKLREA
RARIDAYTERTGREILLEVDGGVKADNIAEIAAAGADAFVAGSAIFGKPDYRKVIDEMRAALATVERS

Sequences:

>Translated_228_residues
MTQFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQVPIDVHLMVRPVDRIVPDF
AKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPATPLNYLDHVMDRLDFVLLMSVNPGFGGQSFIPETLNKLREA
RARIDAYTERTGREILLEVDGGVKADNIAEIAAAGADAFVAGSAIFGKPDYRKVIDEMRAALATVERS
>Mature_227_residues
TQFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQVPIDVHLMVRPVDRIVPDFA
KAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPATPLNYLDHVMDRLDFVLLMSVNPGFGGQSFIPETLNKLREAR
ARIDAYTERTGREILLEVDGGVKADNIAEIAAAGADAFVAGSAIFGKPDYRKVIDEMRAALATVERS

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=217, Percent_Identity=39.63133640553, Blast_Score=156, Evalue=1e-38,
Organism=Homo sapiens, GI219879828, Length=217, Percent_Identity=37.7880184331797, Blast_Score=147, Evalue=6e-36,
Organism=Homo sapiens, GI24307923, Length=172, Percent_Identity=32.5581395348837, Blast_Score=93, Evalue=2e-19,
Organism=Escherichia coli, GI1789788, Length=226, Percent_Identity=72.5663716814159, Blast_Score=340, Evalue=5e-95,
Organism=Escherichia coli, GI1790523, Length=215, Percent_Identity=38.6046511627907, Blast_Score=155, Evalue=2e-39,
Organism=Escherichia coli, GI1790754, Length=214, Percent_Identity=30.8411214953271, Blast_Score=96, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17552948, Length=222, Percent_Identity=39.6396396396396, Blast_Score=155, Evalue=1e-38,
Organism=Saccharomyces cerevisiae, GI6322341, Length=241, Percent_Identity=36.9294605809129, Blast_Score=159, Evalue=4e-40,
Organism=Drosophila melanogaster, GI24586301, Length=221, Percent_Identity=37.10407239819, Blast_Score=146, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 24981; Mature: 24850

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHV
CCCEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCE
QVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPAT
ECCEEEEEEECCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCC
PLNYLDHVMDRLDFVLLMSVNPGFGGQSFIPETLNKLREARARIDAYTERTGREILLEVD
HHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
GGVKADNIAEIAAAGADAFVAGSAIFGKPDYRKVIDEMRAALATVERS
CCCCCCHHHHHHHCCCCHHHCCCEEECCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHV
CCEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCE
QVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPAT
ECCEEEEEEECCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCC
PLNYLDHVMDRLDFVLLMSVNPGFGGQSFIPETLNKLREARARIDAYTERTGREILLEVD
HHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
GGVKADNIAEIAAAGADAFVAGSAIFGKPDYRKVIDEMRAALATVERS
CCCCCCHHHHHHHCCCCHHHCCCEEECCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]