Click here to switch to the map view.

The map label for this gene is gph [C]

Identifier: 116688559

GI number: 116688559

Start: 595720

End: 596484

Strand: Reverse

Name: gph [C]

Synonym: Bcen2424_0535

Alternate gene names: 116688559

Gene position: 596484-595720 (Counterclockwise)

Preceding gene: 116688560

Following gene: 116688558

Centisome position: 17.12

GC content: 69.8

Gene sequence:

>765_bases
GTGGCCGACTCGTCGTTCGCCGGCCGCGCGCCGGCCGGGGCCGCCACGGACGCGGCCCCGATCCGCTTCGCCGCGCCGCG
CATCGATGCGGCGCTGATCGACCTCGACGGCACGATGGTCGACACGGCCGACGATTTCACGGCCGGCCTGAACGGGATGC
TCGCGCAGCTCGGCGCGCCGGCGACGTCGCGCGACGAAGTGATCGGCTACGTCGGCAAGGGCTCCGAACACCTGATCCAG
AGCGTGCTGAAGCCGCGCTTCCCGGCCGACGAAGCGCACGCGCGCTTCGACGACGCACTCGCGATCTACCAGAGCGAATA
CGCGAAGATCAACGGCCGCCACACGCGTCTCTATCCGGACGTGGCAGCCGGGCTCGACGCGCTGCGCGCGGCCGGCATCC
GGCTCGCGTGCGTGACGAACAAGCCGCACCGCTTCGCGGTCGAGCTGCTCGAACAATATGGATTGGCCGGCTGCTTCGGC
ATCGTGCTGGGCGGCGACAGCGTCGCGCGCAAGAAGCCCGATCCGCTGCCGATGCTGACGGCCTGCGACGCGCTGGGCGT
CGCGCCGGACGCCGCGGTCGCGATCGGCGACTCGGAAAACGACGCGCTGGCCGGCCGCGCGGCCGGGATGGCGACGCTGA
CGGTGCCGTACGGCTACAACCACGGCAAAGCTATACAAACGATAAATTCGGATGGTATAGTCGATTCGTTGCTGGTCGCG
GCTCGCGCAATTTCCGCGCACAACGCCGGCCGGCCAACCCTCTGA

Upstream 100 bases:

>100_bases
GCGTTCGTCGCGGGCTCGGCGATCTTCGGCAAGCCCGACTACCGCAAGGTGATCGACGAGATGCGCGCGGCGCTCGCGAC
CGTCGAACGGAGCTGACGCC

Downstream 100 bases:

>100_bases
TTATTTCTTCCATCCGCATGTTTCTGAATAAAAAACGGAGTCTGAGCAGCATCGACCGGGGAGCCTGGCCCTGGCGTCGC
TGGTCGCGCTAACCTCTTCG

Product: phosphoglycolate phosphatase

Products: NA

Alternate protein names: PGP; PGPase [H]

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MADSSFAGRAPAGAATDAAPIRFAAPRIDAALIDLDGTMVDTADDFTAGLNGMLAQLGAPATSRDEVIGYVGKGSEHLIQ
SVLKPRFPADEAHARFDDALAIYQSEYAKINGRHTRLYPDVAAGLDALRAAGIRLACVTNKPHRFAVELLEQYGLAGCFG
IVLGGDSVARKKPDPLPMLTACDALGVAPDAAVAIGDSENDALAGRAAGMATLTVPYGYNHGKAIQTINSDGIVDSLLVA
ARAISAHNAGRPTL

Sequences:

>Translated_254_residues
MADSSFAGRAPAGAATDAAPIRFAAPRIDAALIDLDGTMVDTADDFTAGLNGMLAQLGAPATSRDEVIGYVGKGSEHLIQ
SVLKPRFPADEAHARFDDALAIYQSEYAKINGRHTRLYPDVAAGLDALRAAGIRLACVTNKPHRFAVELLEQYGLAGCFG
IVLGGDSVARKKPDPLPMLTACDALGVAPDAAVAIGDSENDALAGRAAGMATLTVPYGYNHGKAIQTINSDGIVDSLLVA
ARAISAHNAGRPTL
>Mature_253_residues
ADSSFAGRAPAGAATDAAPIRFAAPRIDAALIDLDGTMVDTADDFTAGLNGMLAQLGAPATSRDEVIGYVGKGSEHLIQS
VLKPRFPADEAHARFDDALAIYQSEYAKINGRHTRLYPDVAAGLDALRAAGIRLACVTNKPHRFAVELLEQYGLAGCFGI
VLGGDSVARKKPDPLPMLTACDALGVAPDAAVAIGDSENDALAGRAAGMATLTVPYGYNHGKAIQTINSDGIVDSLLVAA
RAISAHNAGRPTL

Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stres

COG id: COG0546

COG function: function code R; Predicted phosphatases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1789787, Length=223, Percent_Identity=35.4260089686099, Blast_Score=128, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR000150
- InterPro:   IPR006346
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.1.3.18 [H]

Molecular weight: Translated: 26222; Mature: 26091

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADSSFAGRAPAGAATDAAPIRFAAPRIDAALIDLDGTMVDTADDFTAGLNGMLAQLGAP
CCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCEEECCHHHHHHHHHHHHHHCCC
ATSRDEVIGYVGKGSEHLIQSVLKPRFPADEAHARFDDALAIYQSEYAKINGRHTRLYPD
CCCCCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCH
VAAGLDALRAAGIRLACVTNKPHRFAVELLEQYGLAGCFGIVLGGDSVARKKPDPLPMLT
HHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCHHHCCCCCCCCHHH
ACDALGVAPDAAVAIGDSENDALAGRAAGMATLTVPYGYNHGKAIQTINSDGIVDSLLVA
HHHHHCCCCCCEEEECCCCCCCHHHHCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHH
ARAISAHNAGRPTL
HHHHHHCCCCCCCC
>Mature Secondary Structure 
ADSSFAGRAPAGAATDAAPIRFAAPRIDAALIDLDGTMVDTADDFTAGLNGMLAQLGAP
CCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCEEECCHHHHHHHHHHHHHHCCC
ATSRDEVIGYVGKGSEHLIQSVLKPRFPADEAHARFDDALAIYQSEYAKINGRHTRLYPD
CCCCCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCH
VAAGLDALRAAGIRLACVTNKPHRFAVELLEQYGLAGCFGIVLGGDSVARKKPDPLPMLT
HHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCHHHCCCCCCCCHHH
ACDALGVAPDAAVAIGDSENDALAGRAAGMATLTVPYGYNHGKAIQTINSDGIVDSLLVA
HHHHHCCCCCCEEEECCCCCCCHHHHCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHH
ARAISAHNAGRPTL
HHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA