Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is gph [C]

Identifier: 116688540

GI number: 116688540

Start: 574563

End: 575186

Strand: Direct

Name: gph [C]

Synonym: Bcen2424_0516

Alternate gene names: 116688540

Gene position: 574563-575186 (Clockwise)

Preceding gene: 116688539

Following gene: 116688544

Centisome position: 16.49

GC content: 66.67

Gene sequence:

>624_bases
ATGACGATCAAGGCAGTGGTGTTCGATTTCGGCGGGGTGCTGATCGACTGGAGCCCCGAGTACCTTTACCGCGAACTGAT
TCCCGACGCCGCCGAGCGTCGCTGGTTCCTCACGCACGTGTGCGCGATGGACTGGGTCGTCCGCCAGGACGGCGGGCAGA
CGATCGAGGAAGGCACGGCCGAACTCGTCGCGAAGTTTCCGGAGCACGAAGCGCTGATCCGCGCGTTCTATGCGCGCTGG
CACGAAATGATCGGCGGCGTGCTCGAAGAGGGCGCGGCGCTCGTCGACCGGCTGGAAGCGCAGGGGATGCCGCTGTTCGG
GCTGACGAACTGGTCCGCGCAGACGTTTCCGTATGCATGGGACAACTTCCCGGTGCTGCGCCGCTTCAAGGACATCGTCG
TGTCGGGCCGCGTGAAGCTCGTGAAACCCGATCCGGCGATCTACCGCGAGATGCATGCGCGGATCGAGCCGCACCTGCCC
GGCATCGCGCCGCACGAGCTCGTGTTCATCGACGACAACGCGCACAACGCGGCGGCCGCGACGGCGCTCGGCTGGCACGG
CATTCATCATACGAGCGCGGCGGCGACCGAAGCGCGGCTGCGCGAACTGGGCGCGCTCGTGTAA

Upstream 100 bases:

>100_bases
AGATCGTCGCGCACCATCACTTCATCTGGAACAACAATTCGCTGTCGGGCAACGCGGTGACGCCGCGTCCGCTCGCGGAC
GTGCTCGCTACGGAGTTTGC

Downstream 100 bases:

>100_bases
GCGGCGGGGAAGCCACGCGGGATAAAAAAAGCGAGCCAAGGGCTCGCTTTTTCGTTGTGCTGTTCGGAAGTGGCCCGCTT
CGGCATCCGGCCCCGCGTGA

Product: HAD family hydrolase

Products: Glycolate; Phosphate [C]

Alternate protein names: HAD-Superfamily Hydrolase; Hydrolase; Alpha Beta Hydrolase; Haloacid Dehalogenase-Like Hydrolase; HAD Superfamily Hydrolase; HAD Hydrolase Family IA; 2-Haloacid Dehalogenase; Hydrolase Haloacid Dehalogenase-Like Family Protein; Haloacid Dehalogenase Superfamily Protein; Hydrolase Protein; Haloacid Dehalogenase-Like Family Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase-Like Hydrolase Protein; Hydrolase Protein Haloacid Dehalogenase-Like Family; HAD Family Phosphatase; HAD Hydrolase Superfamily Protein

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MTIKAVVFDFGGVLIDWSPEYLYRELIPDAAERRWFLTHVCAMDWVVRQDGGQTIEEGTAELVAKFPEHEALIRAFYARW
HEMIGGVLEEGAALVDRLEAQGMPLFGLTNWSAQTFPYAWDNFPVLRRFKDIVVSGRVKLVKPDPAIYREMHARIEPHLP
GIAPHELVFIDDNAHNAAAATALGWHGIHHTSAAATEARLRELGALV

Sequences:

>Translated_207_residues
MTIKAVVFDFGGVLIDWSPEYLYRELIPDAAERRWFLTHVCAMDWVVRQDGGQTIEEGTAELVAKFPEHEALIRAFYARW
HEMIGGVLEEGAALVDRLEAQGMPLFGLTNWSAQTFPYAWDNFPVLRRFKDIVVSGRVKLVKPDPAIYREMHARIEPHLP
GIAPHELVFIDDNAHNAAAATALGWHGIHHTSAAATEARLRELGALV
>Mature_206_residues
TIKAVVFDFGGVLIDWSPEYLYRELIPDAAERRWFLTHVCAMDWVVRQDGGQTIEEGTAELVAKFPEHEALIRAFYARWH
EMIGGVLEEGAALVDRLEAQGMPLFGLTNWSAQTFPYAWDNFPVLRRFKDIVVSGRVKLVKPDPAIYREMHARIEPHLPG
IAPHELVFIDDNAHNAAAATALGWHGIHHTSAAATEARLRELGALV

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.3.18 [C]

Molecular weight: Translated: 23264; Mature: 23133

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKAVVFDFGGVLIDWSPEYLYRELIPDAAERRWFLTHVCAMDWVVRQDGGQTIEEGTA
CCEEEEEEECCCEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
ELVAKFPEHEALIRAFYARWHEMIGGVLEEGAALVDRLEAQGMPLFGLTNWSAQTFPYAW
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC
DNFPVLRRFKDIVVSGRVKLVKPDPAIYREMHARIEPHLPGIAPHELVFIDDNAHNAAAA
CCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHH
TALGWHGIHHTSAAATEARLRELGALV
HHHHHCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TIKAVVFDFGGVLIDWSPEYLYRELIPDAAERRWFLTHVCAMDWVVRQDGGQTIEEGTA
CEEEEEEECCCEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
ELVAKFPEHEALIRAFYARWHEMIGGVLEEGAALVDRLEAQGMPLFGLTNWSAQTFPYAW
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC
DNFPVLRRFKDIVVSGRVKLVKPDPAIYREMHARIEPHLPGIAPHELVFIDDNAHNAAAA
CCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHH
TALGWHGIHHTSAAATEARLRELGALV
HHHHHCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mg2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): 0.57 {phosphoglycolate}} [C]

Substrates: D-Glycerate 2-phosphatelyc; H2O [C]

Specific reaction: D-Glycerate 2-phosphatelyc + H2O --> Glycolate + Phosphate [C]

General reaction: Additional information:

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA