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The map label for this gene is yecD [H]

Identifier: 116688539

GI number: 116688539

Start: 574015

End: 574566

Strand: Direct

Name: yecD [H]

Synonym: Bcen2424_0515

Alternate gene names: 116688539

Gene position: 574015-574566 (Clockwise)

Preceding gene: 116688538

Following gene: 116688540

Centisome position: 16.48

GC content: 69.93

Gene sequence:

>552_bases
ATGGCAGACACCGCGGTGATCGTGGTCGACATGCAGCGCGGGCTGGTGGAGCGGGCGCAGCCCGCGTACCGGCTCGACGA
CGTGGTGTCGGGCATCAACCGGTTGACGGCGGCGGCGCGCGCGGCGAACGCGCCGGTGTGCTTCGTGCAGCACGACGGCG
ACGCGGACGACGACGTCGTGCCCGGCACGCCGGGCTGGGAACTGCATGCGGGGCTGGTCGTCGGTCGCGACGACTGGCGC
GTGCGCAAGCAGGCGAGCGATGCGTTTCACGACACGCCACTCGCGGCGCAGCTCGATCGCCACGGCATCCGCTCGGTGCT
GATCTGCGGCTATGCGACCGAGTTTTGCGTCGATTCGGCCGCGCGCCGCGCCGCGCTGCTCGGCTACCGGACGACCGTCG
TGTCCGACCTGCACACGACGAACGAGCGTGCCCACCTGTCGGCGGCGCAGATCGTCGCGCACCATCACTTCATCTGGAAC
AACAATTCGCTGTCGGGCAACGCGGTGACGCCGCGTCCGCTCGCGGACGTGCTCGCTACGGAGTTTGCATGA

Upstream 100 bases:

>100_bases
ACGCGCGTACGCAGCCGATCTGACGCAACGCACGGTAACGGCCGGATAGCGATCCGGTAACGATCGAACGACGGCCGGCC
GATAACAGCGAGGGCAAGCA

Downstream 100 bases:

>100_bases
CGATCAAGGCAGTGGTGTTCGATTTCGGCGGGGTGCTGATCGACTGGAGCCCCGAGTACCTTTACCGCGAACTGATTCCC
GACGCCGCCGAGCGTCGCTG

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MADTAVIVVDMQRGLVERAQPAYRLDDVVSGINRLTAAARAANAPVCFVQHDGDADDDVVPGTPGWELHAGLVVGRDDWR
VRKQASDAFHDTPLAAQLDRHGIRSVLICGYATEFCVDSAARRAALLGYRTTVVSDLHTTNERAHLSAAQIVAHHHFIWN
NNSLSGNAVTPRPLADVLATEFA

Sequences:

>Translated_183_residues
MADTAVIVVDMQRGLVERAQPAYRLDDVVSGINRLTAAARAANAPVCFVQHDGDADDDVVPGTPGWELHAGLVVGRDDWR
VRKQASDAFHDTPLAAQLDRHGIRSVLICGYATEFCVDSAARRAALLGYRTTVVSDLHTTNERAHLSAAQIVAHHHFIWN
NNSLSGNAVTPRPLADVLATEFA
>Mature_182_residues
ADTAVIVVDMQRGLVERAQPAYRLDDVVSGINRLTAAARAANAPVCFVQHDGDADDDVVPGTPGWELHAGLVVGRDDWRV
RKQASDAFHDTPLAAQLDRHGIRSVLICGYATEFCVDSAARRAALLGYRTTVVSDLHTTNERAHLSAAQIVAHHHFIWNN
NSLSGNAVTPRPLADVLATEFA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081992, Length=147, Percent_Identity=31.2925170068027, Blast_Score=67, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 19785; Mature: 19654

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTAVIVVDMQRGLVERAQPAYRLDDVVSGINRLTAAARAANAPVCFVQHDGDADDDVV
CCCCEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
PGTPGWELHAGLVVGRDDWRVRKQASDAFHDTPLAAQLDRHGIRSVLICGYATEFCVDSA
CCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCHHHEEHHHHHHHHHHHHH
ARRAALLGYRTTVVSDLHTTNERAHLSAAQIVAHHHFIWNNNSLSGNAVTPRPLADVLAT
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHH
EFA
CCC
>Mature Secondary Structure 
ADTAVIVVDMQRGLVERAQPAYRLDDVVSGINRLTAAARAANAPVCFVQHDGDADDDVV
CCCEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
PGTPGWELHAGLVVGRDDWRVRKQASDAFHDTPLAAQLDRHGIRSVLICGYATEFCVDSA
CCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCHHHEEHHHHHHHHHHHHH
ARRAALLGYRTTVVSDLHTTNERAHLSAAQIVAHHHFIWNNNSLSGNAVTPRPLADVLAT
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHH
EFA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]