The gene/protein map for NC_008542 is currently unavailable.
Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688522

Identifier: 116688522

GI number: 116688522

Start: 556762

End: 557334

Strand: Reverse

Name: 116688522

Synonym: Bcen2424_0498

Alternate gene names: NA

Gene position: 557334-556762 (Counterclockwise)

Preceding gene: 116688523

Following gene: 116688517

Centisome position: 16.0

GC content: 65.45

Gene sequence:

>573_bases
ATGACCGACACCCGCCCCGACTCGCACGACGACATCCTCGCCGCCACGCGGCACTGGCTCGCGCGCGCGGTGATCGGGCT
CAATCTGTGCCCGTTCGCGAAAAGCGTCTACGTGAAGGAACAGGTGCGCTACGCGATCAGCGAAGCGACGACCCTGGAGG
ACGCGCTCGCCGAACTCGAAACCGAGCTGCGCTTGCTCGACGCGGCGGACCCGCAGCAGATCGATACGACGCTCGTGATC
TACCCGCATGCGTTCGCCGATTTCGTCGACTACAACGATGCGCTGTTCTTCGCCGAGCGGCTCGTTCAGCAATTGCGGCT
CGACGGCGTGCTGCAGATCGCGAGCTTCCATCCGCAATACCAGTTCGACGGCACCGAACCCGACGACATCGAGAACTACA
CGAACCGCGCGCCGTATCCGATCCTGCACCTGCTGCGCGAGGACAGCATCGCGCGCGCGGTCGACGCGTTCCCGGACGCG
TCCGCGATCTACGAAAAGAATCAGGAAACGCTGCGCCGCCTCGGCCACGAAGGCTGGCGCGAATGGATGCGCCGGCCGGG
CGACGACGTGTGA

Upstream 100 bases:

>100_bases
TGATCGAAGCCGCCTGCGCGTGACGGGCCGCGCGGGTTCGTCTGCGGCGCGCCCCGCTACAATGCAGCCCTCATAGCCCT
TCCGCCCGACTGGTATCACG

Downstream 100 bases:

>100_bases
CGTGTGCCGCGCGGGCGCCATGCCCGCGCACCCGCGCCGTCAGCCTTCGGCCGGCTCGACGGCGGCGTCGCCCGCCGCAG
CGGCTTGCGCGACGAAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MTDTRPDSHDDILAATRHWLARAVIGLNLCPFAKSVYVKEQVRYAISEATTLEDALAELETELRLLDAADPQQIDTTLVI
YPHAFADFVDYNDALFFAERLVQQLRLDGVLQIASFHPQYQFDGTEPDDIENYTNRAPYPILHLLREDSIARAVDAFPDA
SAIYEKNQETLRRLGHEGWREWMRRPGDDV

Sequences:

>Translated_190_residues
MTDTRPDSHDDILAATRHWLARAVIGLNLCPFAKSVYVKEQVRYAISEATTLEDALAELETELRLLDAADPQQIDTTLVI
YPHAFADFVDYNDALFFAERLVQQLRLDGVLQIASFHPQYQFDGTEPDDIENYTNRAPYPILHLLREDSIARAVDAFPDA
SAIYEKNQETLRRLGHEGWREWMRRPGDDV
>Mature_189_residues
TDTRPDSHDDILAATRHWLARAVIGLNLCPFAKSVYVKEQVRYAISEATTLEDALAELETELRLLDAADPQQIDTTLVIY
PHAFADFVDYNDALFFAERLVQQLRLDGVLQIASFHPQYQFDGTEPDDIENYTNRAPYPILHLLREDSIARAVDAFPDAS
AIYEKNQETLRRLGHEGWREWMRRPGDDV

Specific function: Unknown

COG id: COG3310

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21820; Mature: 21688

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTRPDSHDDILAATRHWLARAVIGLNLCPFAKSVYVKEQVRYAISEATTLEDALAELE
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TELRLLDAADPQQIDTTLVIYPHAFADFVDYNDALFFAERLVQQLRLDGVLQIASFHPQY
HHHHHHCCCCCCHHCCEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QFDGTEPDDIENYTNRAPYPILHLLREDSIARAVDAFPDASAIYEKNQETLRRLGHEGWR
CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHH
EWMRRPGDDV
HHHHCCCCCC
>Mature Secondary Structure 
TDTRPDSHDDILAATRHWLARAVIGLNLCPFAKSVYVKEQVRYAISEATTLEDALAELE
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TELRLLDAADPQQIDTTLVIYPHAFADFVDYNDALFFAERLVQQLRLDGVLQIASFHPQY
HHHHHHCCCCCCHHCCEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QFDGTEPDDIENYTNRAPYPILHLLREDSIARAVDAFPDASAIYEKNQETLRRLGHEGWR
CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHH
EWMRRPGDDV
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA