| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is 116688517
Identifier: 116688517
GI number: 116688517
Start: 552952
End: 553209
Strand: Reverse
Name: 116688517
Synonym: Bcen2424_0493
Alternate gene names: NA
Gene position: 553209-552952 (Counterclockwise)
Preceding gene: 116688522
Following gene: 116688516
Centisome position: 15.88
GC content: 60.08
Gene sequence:
>258_bases ATGACGGCGAATTTACGGGATGGCGACACGCTGTCCTTCCGTCCTGCGGACTGGCCCGGCCAGCCCCGTAGGTCGTCGGT TCAAAGGGATTGCGCGCCCGCGTCGGGCGTGCGGCCCCGTGTCGTGCGCGCGAAATCAATTCAGTACAACACGCGCCCGG CCATTTTGAACCGGCCAGTTAACCGACATCCGGAAAATCCAGAGGGGGCAGTAAACCATGATTACCTTTACGTAGTCGGC CGCCGTCTTTTCGAATAA
Upstream 100 bases:
>100_bases AATTCAATAGATGCTCTTTCTAAATTTTTCGTTTCCTTTACCCAAAACCATCAAGTATATTTACGCATCCTTGGAGCAAG CCGACAAACCTTGAAGCCGC
Downstream 100 bases:
>100_bases TCCGTCATTGGCATTTTTTCGCTGTTGATTAAACGGCGAGGGGATTGCTTTTGCCGGCGTTTTCGCAGCACTGAACGATT CTTTCAACAATCGAGGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MTANLRDGDTLSFRPADWPGQPRRSSVQRDCAPASGVRPRVVRAKSIQYNTRPAILNRPVNRHPENPEGAVNHDYLYVVG RRLFE
Sequences:
>Translated_85_residues MTANLRDGDTLSFRPADWPGQPRRSSVQRDCAPASGVRPRVVRAKSIQYNTRPAILNRPVNRHPENPEGAVNHDYLYVVG RRLFE >Mature_84_residues TANLRDGDTLSFRPADWPGQPRRSSVQRDCAPASGVRPRVVRAKSIQYNTRPAILNRPVNRHPENPEGAVNHDYLYVVGR RLFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9668; Mature: 9537
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANLRDGDTLSFRPADWPGQPRRSSVQRDCAPASGVRPRVVRAKSIQYNTRPAILNRPV CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCC NRHPENPEGAVNHDYLYVVGRRLFE CCCCCCCCCCCCCCCCEEECHHHCC >Mature Secondary Structure TANLRDGDTLSFRPADWPGQPRRSSVQRDCAPASGVRPRVVRAKSIQYNTRPAILNRPV CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCC NRHPENPEGAVNHDYLYVVGRRLFE CCCCCCCCCCCCCCCCEEECHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA