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The map label for this gene is ompA [H]

Identifier: 116688507

GI number: 116688507

Start: 538876

End: 539826

Strand: Reverse

Name: ompA [H]

Synonym: Bcen2424_0483

Alternate gene names: 116688507

Gene position: 539826-538876 (Counterclockwise)

Preceding gene: 116688508

Following gene: 116688504

Centisome position: 15.49

GC content: 69.61

Gene sequence:

>951_bases
ATGCATCGCACGATTCAGGTCCGGCGCGCGCGCCTGTCGGCCGCCGTCTCGCCCGCCCTCGCCGCGCTGTTCGCGGCCGG
CCTCGTCGCGAGCGGCGCGGCCTTCGCGCAGAACACGGGCGCGACCGTCACGCCGGTCGGCAACGGCACGGTCGCGACGA
CCGCGCTGCCGCAGGCGAACCCGAACGCCGGCGGCGCGTCCGGCACGGTGGTGCACGGCACCGCCGGCACGATCGCGCCG
CCGCCCGCGAACGCGACGCCCGGCCAGGTGGTGGTCGGCGGCAAGGTGCCCGACGAGGCGACCAAGGCCGCCGTGCTGCA
GAAGCTGCGCGACACCTACGGCGCGACGAACGTCGTCGACCAGGTCGAGGTGGGCGACGTCGCGACGCCGCCGAACTGGA
GCGCGAACGTGCAGAAGCTGCTCGGCGCGCAGCTCAAGCAGATCAGCAAGGGCCAGTTGAAGATCAACGGCACGCAGATC
GAGATGAAGGGCGAGGTGCACAACGAGGCGCAGCGCCAGCAGCTTGCGAGCGACATGGCGAACACGCTGAACCCGACGTA
CACGATCAAGAACGGGCTGCGCGTGTCGGCGTCCGAACAGGGCGTGCTCGACCAGACGCTCGCGAACCGGACGATCGAGT
TCGAGACCGGCAGCGCGACGCTGACGCCGCAGGGCAAGCTGATCCTCGACCAGATGGCGGCCGCGCTGGCGAAGATGCAG
AACCGCACGGTCGACATCATCGGCCACACCGACAACTCGGGGAACCGGACGTCGAACATCGCGCTGAGCCAGGCGCGCGC
GGATGCGGTGAAGGGGTATCTGATCACGAAGAGCATTCCACCGCAGCAGATGACGACAACGGGGGTGGGCCCGGATCAGC
CTATTGCGCCGAATGATATGGCGGATGGGCGGGCGAGGAATCGGCGGATCGAGTTCCGGGTGGGGCAGTAA

Upstream 100 bases:

>100_bases
CACCAGATCAGCAAGCTCGTCAGCTACCTCGAACAACCGCAACTCTCGCTGCGCGTCGCCATCGACGCGTTCCGCGAAGC
GTTCATCGGAGGCTGACGGC

Downstream 100 bases:

>100_bases
GCGAGGGCGGCGATTGTGCGGGCCCGTGTTCGACGCTTGACGATGGACATGAACGTTGCATTGCGCGCCGGCCGGGGCTT
GCCTGATTTTGGCGATCTGC

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MHRTIQVRRARLSAAVSPALAALFAAGLVASGAAFAQNTGATVTPVGNGTVATTALPQANPNAGGASGTVVHGTAGTIAP
PPANATPGQVVVGGKVPDEATKAAVLQKLRDTYGATNVVDQVEVGDVATPPNWSANVQKLLGAQLKQISKGQLKINGTQI
EMKGEVHNEAQRQQLASDMANTLNPTYTIKNGLRVSASEQGVLDQTLANRTIEFETGSATLTPQGKLILDQMAAALAKMQ
NRTVDIIGHTDNSGNRTSNIALSQARADAVKGYLITKSIPPQQMTTTGVGPDQPIAPNDMADGRARNRRIEFRVGQ

Sequences:

>Translated_316_residues
MHRTIQVRRARLSAAVSPALAALFAAGLVASGAAFAQNTGATVTPVGNGTVATTALPQANPNAGGASGTVVHGTAGTIAP
PPANATPGQVVVGGKVPDEATKAAVLQKLRDTYGATNVVDQVEVGDVATPPNWSANVQKLLGAQLKQISKGQLKINGTQI
EMKGEVHNEAQRQQLASDMANTLNPTYTIKNGLRVSASEQGVLDQTLANRTIEFETGSATLTPQGKLILDQMAAALAKMQ
NRTVDIIGHTDNSGNRTSNIALSQARADAVKGYLITKSIPPQQMTTTGVGPDQPIAPNDMADGRARNRRIEFRVGQ
>Mature_316_residues
MHRTIQVRRARLSAAVSPALAALFAAGLVASGAAFAQNTGATVTPVGNGTVATTALPQANPNAGGASGTVVHGTAGTIAP
PPANATPGQVVVGGKVPDEATKAAVLQKLRDTYGATNVVDQVEVGDVATPPNWSANVQKLLGAQLKQISKGQLKINGTQI
EMKGEVHNEAQRQQLASDMANTLNPTYTIKNGLRVSASEQGVLDQTLANRTIEFETGSATLTPQGKLILDQMAAALAKMQ
NRTVDIIGHTDNSGNRTSNIALSQARADAVKGYLITKSIPPQQMTTTGVGPDQPIAPNDMADGRARNRRIEFRVGQ

Specific function: Structural protein that may protect the integrity of the bacterium [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=101, Percent_Identity=41.5841584158416, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787191, Length=114, Percent_Identity=32.4561403508772, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 32777; Mature: 32777

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRTIQVRRARLSAAVSPALAALFAAGLVASGAAFAQNTGATVTPVGNGTVATTALPQAN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCEEEEEECCCCC
PNAGGASGTVVHGTAGTIAPPPANATPGQVVVGGKVPDEATKAAVLQKLRDTYGATNVVD
CCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHH
QVEVGDVATPPNWSANVQKLLGAQLKQISKGQLKINGTQIEMKGEVHNEAQRQQLASDMA
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCEEEEECCCHHHHHHHHHHHHHHH
NTLNPTYTIKNGLRVSASEQGVLDQTLANRTIEFETGSATLTPQGKLILDQMAAALAKMQ
HHCCCCEEECCCEEECCCCCCHHHHHHHCCEEEEECCCEEECCCCHHHHHHHHHHHHHHC
NRTVDIIGHTDNSGNRTSNIALSQARADAVKGYLITKSIPPQQMTTTGVGPDQPIAPNDM
CCEEEEEECCCCCCCCCCCEEHHHHHHHHHCCEEEECCCCCCCCEECCCCCCCCCCCCCC
ADGRARNRRIEFRVGQ
CCCCCCCCEEEEEECC
>Mature Secondary Structure
MHRTIQVRRARLSAAVSPALAALFAAGLVASGAAFAQNTGATVTPVGNGTVATTALPQAN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCEEEEEECCCCC
PNAGGASGTVVHGTAGTIAPPPANATPGQVVVGGKVPDEATKAAVLQKLRDTYGATNVVD
CCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHH
QVEVGDVATPPNWSANVQKLLGAQLKQISKGQLKINGTQIEMKGEVHNEAQRQQLASDMA
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCEEEEECCCHHHHHHHHHHHHHHH
NTLNPTYTIKNGLRVSASEQGVLDQTLANRTIEFETGSATLTPQGKLILDQMAAALAKMQ
HHCCCCEEECCCEEECCCCCCHHHHHHHCCEEEEECCCEEECCCCHHHHHHHHHHHHHHC
NRTVDIIGHTDNSGNRTSNIALSQARADAVKGYLITKSIPPQQMTTTGVGPDQPIAPNDM
CCEEEEEECCCCCCCCCCCEEHHHHHHHHHCCEEEECCCCCCCCEECCCCCCCCCCCCCC
ADGRARNRRIEFRVGQ
CCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1447140 [H]