| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688506
Identifier: 116688506
GI number: 116688506
Start: 537988
End: 538608
Strand: Direct
Name: 116688506
Synonym: Bcen2424_0482
Alternate gene names: NA
Gene position: 537988-538608 (Clockwise)
Preceding gene: 116688505
Following gene: 116688511
Centisome position: 15.44
GC content: 61.35
Gene sequence:
>621_bases ATGCTGGCCTGGTGCGCGGCATCGGAGGCTCAGGTGGCTCGCGTTGCAGCGGCGGACGCCGTGCAGATCGAGGCGACCGT CAAGCAATACTACTCACTGTCACACGCTGACGCGTCGTGCCGTTTCAGCCGTACCGACGACAACGGCATGCCGCTGGACC CCCGCGTGCATCACCGCGCGTATCGCGACGCGCAGTATACGAGGACATTCAAGACGGTCTTTTCTCATGCACTGTTTGCG CTGATGAAAAGAACGTGCGTCGATTCCGACAAGGTGACTGGAATGCTCGACGTACGCTTGTCCGACTCCGAGATCGACAG CGATCCATCGAACTATGGCAACGACGTGCGAATGAAGGTGACGCGTCCCGTGAGGATACTGGCCGCGGATCCATCGCGCG TCCGAGTCCGTGTCGACTGGTCCGAGATGGTGAAGGGCGCCCGCAAGCCTTATTCGGTGGGGCGCTCGGACGTCATCCTC GTCAAGGAAGGCGACGCTTGGTTGATCGACGACGTTTATTCACTGGGTGTGGCGGATGGACCGCCGTCGCAGCTCGATAT GTCGATCCAGGATTTCGAGCAGTCGCCGGGCGTTGTCCGTCTGCGTGGGAACGCGCCGTAG
Upstream 100 bases:
>100_bases ATCAAGGCTACACAATGGCGCAACTCAAGGCCGATTTCGATAAGTATGTTAAGGAGTTCAGTAATTGAAACTGCGTGCGT CGTTGTTCCTGTCGATATCG
Downstream 100 bases:
>100_bases CGCATGGTGAGCGGCGGCTGAGGTCGCCCTCACAAGGTGGTGGCTGCCCCCAAGCCCCCCGCAACCCGCAACCCGCTGCC CGCTGCCCGCTGCCCGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MLAWCAASEAQVARVAAADAVQIEATVKQYYSLSHADASCRFSRTDDNGMPLDPRVHHRAYRDAQYTRTFKTVFSHALFA LMKRTCVDSDKVTGMLDVRLSDSEIDSDPSNYGNDVRMKVTRPVRILAADPSRVRVRVDWSEMVKGARKPYSVGRSDVIL VKEGDAWLIDDVYSLGVADGPPSQLDMSIQDFEQSPGVVRLRGNAP
Sequences:
>Translated_206_residues MLAWCAASEAQVARVAAADAVQIEATVKQYYSLSHADASCRFSRTDDNGMPLDPRVHHRAYRDAQYTRTFKTVFSHALFA LMKRTCVDSDKVTGMLDVRLSDSEIDSDPSNYGNDVRMKVTRPVRILAADPSRVRVRVDWSEMVKGARKPYSVGRSDVIL VKEGDAWLIDDVYSLGVADGPPSQLDMSIQDFEQSPGVVRLRGNAP >Mature_206_residues MLAWCAASEAQVARVAAADAVQIEATVKQYYSLSHADASCRFSRTDDNGMPLDPRVHHRAYRDAQYTRTFKTVFSHALFA LMKRTCVDSDKVTGMLDVRLSDSEIDSDPSNYGNDVRMKVTRPVRILAADPSRVRVRVDWSEMVKGARKPYSVGRSDVIL VKEGDAWLIDDVYSLGVADGPPSQLDMSIQDFEQSPGVVRLRGNAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22883; Mature: 22883
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAWCAASEAQVARVAAADAVQIEATVKQYYSLSHADASCRFSRTDDNGMPLDPRVHHRA CCEEECCCCHHHHHHHHCCCEEHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHH YRDAQYTRTFKTVFSHALFALMKRTCVDSDKVTGMLDVRLSDSEIDSDPSNYGNDVRMKV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEE TRPVRILAADPSRVRVRVDWSEMVKGARKPYSVGRSDVILVKEGDAWLIDDVYSLGVADG ECCEEEEEECCCEEEEEECHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEHHHHCCCCCC PPSQLDMSIQDFEQSPGVVRLRGNAP CCHHHCCCHHHHCCCCCEEEEECCCC >Mature Secondary Structure MLAWCAASEAQVARVAAADAVQIEATVKQYYSLSHADASCRFSRTDDNGMPLDPRVHHRA CCEEECCCCHHHHHHHHCCCEEHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHH YRDAQYTRTFKTVFSHALFALMKRTCVDSDKVTGMLDVRLSDSEIDSDPSNYGNDVRMKV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEE TRPVRILAADPSRVRVRVDWSEMVKGARKPYSVGRSDVILVKEGDAWLIDDVYSLGVADG ECCEEEEEECCCEEEEEECHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEHHHHCCCCCC PPSQLDMSIQDFEQSPGVVRLRGNAP CCHHHCCCHHHHCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA