Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688505

Identifier: 116688505

GI number: 116688505

Start: 537086

End: 537955

Strand: Direct

Name: 116688505

Synonym: Bcen2424_0481

Alternate gene names: NA

Gene position: 537086-537955 (Clockwise)

Preceding gene: 116688503

Following gene: 116688506

Centisome position: 15.42

GC content: 55.75

Gene sequence:

>870_bases
ATGTACGTTAAGGTCGCGCTCTGGAAAGCAAACGCGATCAAATTCGTCCGCGAAAAGAACGGTACGTTTGCCGGAGCAGG
CGGCAGCTATGCGAAGGTGGCCGGAGCATTTCTGGAGTCGCAGGGTTTCGTCAATGTTACGAGCCAATTGCCCGACGCGC
GTTGGGCGTTGCCCGGCGACGTGATCGTATACCACGTGATGGGCGATGCTGAAACCGCCGACGGGAAAGGCCAACCAGGT
CATATCGACATCCGTACGTATCACTATTATGTCAGCGATTTCAAGCGCAATTATCTATGTGTCAGTGGTGCCGGTCCTGG
TAAGACCCGGCACTTTTATGAACCGATTGGAATCTACAGGAAACAAGGCTTCAGTGACCCGCTGCCGCTTGCGCGCATGA
AGGCATTCCTGAAGATCATCCGCAGCCGGGAAGCGAAGACGTTCCTTGAACTGGCTGGGGACGCGAAGACGTATTACGCG
TCCCAGGGCGTATACACGCTGTCAGGTGCGCTCAAGGATTTGTCGACGTACCCAGATGGCGCGCATCATCAAGGCGCGTA
TCAGATGACTAAAGCTGCATGGCTCGCCGGGCAGCGACCGGAGCAGGGTGCTTTGCCTGCCGACTTTCAGCCCGCTACCC
AGGATCGCTACGCGGTGTTTTTAATGGAGGGGCATCCTGGCCGCTTCGACAAGAGCGGTCAGCCGCAACCCACGGCTCTT
GGTTACGTCAGAACGGGCGAGATCGAGAAAGCCGTAGCATTGCTGCGCAACGAATGGGCATGTATGCCTGGCACGAGTCA
AGATCAAGGCTACACAATGGCGCAACTCAAGGCCGATTTCGATAAGTATGTTAAGGAGTTCAGTAATTGA

Upstream 100 bases:

>100_bases
CCAGTCGCGGGAAAATCGGCAGGCTCAGCGAGGCCCGCAGCGTCCGCTTCTTCGACCGCTTCTGAGCAAGCAAACGAAGA
AGTCGCGTGGTCAGTGCTAC

Downstream 100 bases:

>100_bases
AACTGCGTGCGTCGTTGTTCCTGTCGATATCGATGCTGGCCTGGTGCGCGGCATCGGAGGCTCAGGTGGCTCGCGTTGCA
GCGGCGGACGCCGTGCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MYVKVALWKANAIKFVREKNGTFAGAGGSYAKVAGAFLESQGFVNVTSQLPDARWALPGDVIVYHVMGDAETADGKGQPG
HIDIRTYHYYVSDFKRNYLCVSGAGPGKTRHFYEPIGIYRKQGFSDPLPLARMKAFLKIIRSREAKTFLELAGDAKTYYA
SQGVYTLSGALKDLSTYPDGAHHQGAYQMTKAAWLAGQRPEQGALPADFQPATQDRYAVFLMEGHPGRFDKSGQPQPTAL
GYVRTGEIEKAVALLRNEWACMPGTSQDQGYTMAQLKADFDKYVKEFSN

Sequences:

>Translated_289_residues
MYVKVALWKANAIKFVREKNGTFAGAGGSYAKVAGAFLESQGFVNVTSQLPDARWALPGDVIVYHVMGDAETADGKGQPG
HIDIRTYHYYVSDFKRNYLCVSGAGPGKTRHFYEPIGIYRKQGFSDPLPLARMKAFLKIIRSREAKTFLELAGDAKTYYA
SQGVYTLSGALKDLSTYPDGAHHQGAYQMTKAAWLAGQRPEQGALPADFQPATQDRYAVFLMEGHPGRFDKSGQPQPTAL
GYVRTGEIEKAVALLRNEWACMPGTSQDQGYTMAQLKADFDKYVKEFSN
>Mature_289_residues
MYVKVALWKANAIKFVREKNGTFAGAGGSYAKVAGAFLESQGFVNVTSQLPDARWALPGDVIVYHVMGDAETADGKGQPG
HIDIRTYHYYVSDFKRNYLCVSGAGPGKTRHFYEPIGIYRKQGFSDPLPLARMKAFLKIIRSREAKTFLELAGDAKTYYA
SQGVYTLSGALKDLSTYPDGAHHQGAYQMTKAAWLAGQRPEQGALPADFQPATQDRYAVFLMEGHPGRFDKSGQPQPTAL
GYVRTGEIEKAVALLRNEWACMPGTSQDQGYTMAQLKADFDKYVKEFSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31893; Mature: 31893

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVKVALWKANAIKFVREKNGTFAGAGGSYAKVAGAFLESQGFVNVTSQLPDARWALPGD
CEEEEEEECCHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCEEEHHCCCCCCCCCCCC
VIVYHVMGDAETADGKGQPGHIDIRTYHYYVSDFKRNYLCVSGAGPGKTRHFYEPIGIYR
EEEEEEECCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCCCCCHHCHHHHHH
KQGFSDPLPLARMKAFLKIIRSREAKTFLELAGDAKTYYASQGVYTLSGALKDLSTYPDG
HCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEECCCEEEEHHHHHHHHCCCCC
AHHQGAYQMTKAAWLAGQRPEQGALPADFQPATQDRYAVFLMEGHPGRFDKSGQPQPTAL
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEE
GYVRTGEIEKAVALLRNEWACMPGTSQDQGYTMAQLKADFDKYVKEFSN
EEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYVKVALWKANAIKFVREKNGTFAGAGGSYAKVAGAFLESQGFVNVTSQLPDARWALPGD
CEEEEEEECCHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCEEEHHCCCCCCCCCCCC
VIVYHVMGDAETADGKGQPGHIDIRTYHYYVSDFKRNYLCVSGAGPGKTRHFYEPIGIYR
EEEEEEECCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCCCCCHHCHHHHHH
KQGFSDPLPLARMKAFLKIIRSREAKTFLELAGDAKTYYASQGVYTLSGALKDLSTYPDG
HCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEECCCEEEEHHHHHHHHCCCCC
AHHQGAYQMTKAAWLAGQRPEQGALPADFQPATQDRYAVFLMEGHPGRFDKSGQPQPTAL
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEE
GYVRTGEIEKAVALLRNEWACMPGTSQDQGYTMAQLKADFDKYVKEFSN
EEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA