Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688501

Identifier: 116688501

GI number: 116688501

Start: 532330

End: 533166

Strand: Direct

Name: 116688501

Synonym: Bcen2424_0477

Alternate gene names: NA

Gene position: 532330-533166 (Clockwise)

Preceding gene: 116688500

Following gene: 116688502

Centisome position: 15.28

GC content: 59.38

Gene sequence:

>837_bases
GTGACGTGGCGTAGGTCCGGGCTCGTGGTGGGGCTGCTCGCGGTGGCTTTGAGCTTGAGCGCGTGCGGCAAGTCGGAGCC
GGTGTATAGCGGAATTTCCGTGATGGGCCGGAACTATCTGCCGTACAACATGAACGGCTTCACCATCGCCGATGCCAACG
GCAACAAGGCAAACGGCGGTGGAGACGACCCGCCCGGCGCAGGAGGGGGCAGCGTCGCGTGCTGCTACACGCTCAAGGGC
ACCGAATTTACGGTCAAATGGAAGTACTACGACGCAGATCGATGGACGATGGACGACTCGCACGCGCAACAAGTCGAGAC
CAAGGTCGTGATGCCGCGGTCGGTCGTTCCCGGAAAAGTCGGCAGCCGTATTCTCGAAGTTCATTTCTATCCGGATCGTC
ACGTCGAGTTTCAGTTTCCCGGCGAACTTCTGGATGAATCGCGCATTCCAGTTGCGGATGTTTCGCGATGGATGGCGACG
CACTATCAGGAGCAACTGGACAAGAAATTCGGCGATACGGACGGGCAGTCGCATCGGCGCATCGCTCGTGTCGTCGCGTC
GGCGTGGTTGAAATATCGTCTGACCGATCGCGATGATCTCGAGCAGTATGTGTATTACGCGTTGCTCGTGAACGGCCGGT
TCGATGCACATTCTGAGGTTCAGCGCATCCTGCAAACGGCCGCTGGCAAGCCGGGAATGTTCGCGAAATCGATGCAATCG
CTGCCGAAGCGTGTGTTGTCCTCGCTGTCGAACGATGCGTTCGAAGCAGCGACGGTGCCAGCGATATCCGATGGTTTGCT
GCCACCGCCGCGTGTAGAGGAGGCGCTGCATGGGTGA

Upstream 100 bases:

>100_bases
CGCGGAGAAACGAGCGTCGATGCGGCACTGGCCTCGATCGACGATGCGACGTGGGACGCGATTCGCGATGCGCACGAGCG
GGGATTGCTGGAGGCGCGTA

Downstream 100 bases:

>100_bases
TCGTATCGGGTACGTATTGGGTGCGATTTGCGATGCAGACGACCGGATCCTTCTGGAGGAACTCAGCGGTGCGGCGTCAG
TCTGCGATCGCCGTTTGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MTWRRSGLVVGLLAVALSLSACGKSEPVYSGISVMGRNYLPYNMNGFTIADANGNKANGGGDDPPGAGGGSVACCYTLKG
TEFTVKWKYYDADRWTMDDSHAQQVETKVVMPRSVVPGKVGSRILEVHFYPDRHVEFQFPGELLDESRIPVADVSRWMAT
HYQEQLDKKFGDTDGQSHRRIARVVASAWLKYRLTDRDDLEQYVYYALLVNGRFDAHSEVQRILQTAAGKPGMFAKSMQS
LPKRVLSSLSNDAFEAATVPAISDGLLPPPRVEEALHG

Sequences:

>Translated_278_residues
MTWRRSGLVVGLLAVALSLSACGKSEPVYSGISVMGRNYLPYNMNGFTIADANGNKANGGGDDPPGAGGGSVACCYTLKG
TEFTVKWKYYDADRWTMDDSHAQQVETKVVMPRSVVPGKVGSRILEVHFYPDRHVEFQFPGELLDESRIPVADVSRWMAT
HYQEQLDKKFGDTDGQSHRRIARVVASAWLKYRLTDRDDLEQYVYYALLVNGRFDAHSEVQRILQTAAGKPGMFAKSMQS
LPKRVLSSLSNDAFEAATVPAISDGLLPPPRVEEALHG
>Mature_277_residues
TWRRSGLVVGLLAVALSLSACGKSEPVYSGISVMGRNYLPYNMNGFTIADANGNKANGGGDDPPGAGGGSVACCYTLKGT
EFTVKWKYYDADRWTMDDSHAQQVETKVVMPRSVVPGKVGSRILEVHFYPDRHVEFQFPGELLDESRIPVADVSRWMATH
YQEQLDKKFGDTDGQSHRRIARVVASAWLKYRLTDRDDLEQYVYYALLVNGRFDAHSEVQRILQTAAGKPGMFAKSMQSL
PKRVLSSLSNDAFEAATVPAISDGLLPPPRVEEALHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30663; Mature: 30532

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWRRSGLVVGLLAVALSLSACGKSEPVYSGISVMGRNYLPYNMNGFTIADANGNKANGG
CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCC
GDDPPGAGGGSVACCYTLKGTEFTVKWKYYDADRWTMDDSHAQQVETKVVMPRSVVPGKV
CCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
GSRILEVHFYPDRHVEFQFPGELLDESRIPVADVSRWMATHYQEQLDKKFGDTDGQSHRR
CCEEEEEEECCCCCEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
IARVVASAWLKYRLTDRDDLEQYVYYALLVNGRFDAHSEVQRILQTAAGKPGMFAKSMQS
HHHHHHHHHHHEECCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHH
LPKRVLSSLSNDAFEAATVPAISDGLLPPPRVEEALHG
HHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
TWRRSGLVVGLLAVALSLSACGKSEPVYSGISVMGRNYLPYNMNGFTIADANGNKANGG
CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCC
GDDPPGAGGGSVACCYTLKGTEFTVKWKYYDADRWTMDDSHAQQVETKVVMPRSVVPGKV
CCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
GSRILEVHFYPDRHVEFQFPGELLDESRIPVADVSRWMATHYQEQLDKKFGDTDGQSHRR
CCEEEEEEECCCCCEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
IARVVASAWLKYRLTDRDDLEQYVYYALLVNGRFDAHSEVQRILQTAAGKPGMFAKSMQS
HHHHHHHHHHHEECCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHH
LPKRVLSSLSNDAFEAATVPAISDGLLPPPRVEEALHG
HHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA