| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688472
Identifier: 116688472
GI number: 116688472
Start: 493927
End: 494166
Strand: Direct
Name: 116688472
Synonym: Bcen2424_0448
Alternate gene names: NA
Gene position: 493927-494166 (Clockwise)
Preceding gene: 116688471
Following gene: 116688473
Centisome position: 14.18
GC content: 55.0
Gene sequence:
>240_bases ATGAAGAAATACCTCTACGTCCTGGTTGCCTGCGTTTTGGCCGCCTGTGGGCAGGAATATCACACCAAGGCTTGGTATAT CGAGCATGACGCGGAGCGAGCCAGCAGATTCAAGGTATGCGAGAACGATCCCGCCCAATACCTGCGGCAAGGTTCAGACT GCCTGAACGCGAAAGAAGCAAACGCGATGGTTACTTTCTACGGCAAGGAAGCGGCGCTCAGAGCAGCCCGCGAGCAATAA
Upstream 100 bases:
>100_bases CAGTAGAACTACTAACGTTATAACGTCGTGAAGTTATAAAGTTACGACGTCACAACGCTACAACATCATGACGTTAAAAC ATTACACGGAGGATGTGAAT
Downstream 100 bases:
>100_bases GGAGCGAACCATGGCCTTCGATGCGGTAACGCAGATATTCGACTACATGGATGCCGTGACGCTCCAGATCGTCGCCGAAA ACGTTAGCCGGATGATTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MKKYLYVLVACVLAACGQEYHTKAWYIEHDAERASRFKVCENDPAQYLRQGSDCLNAKEANAMVTFYGKEAALRAAREQ
Sequences:
>Translated_79_residues MKKYLYVLVACVLAACGQEYHTKAWYIEHDAERASRFKVCENDPAQYLRQGSDCLNAKEANAMVTFYGKEAALRAAREQ >Mature_79_residues MKKYLYVLVACVLAACGQEYHTKAWYIEHDAERASRFKVCENDPAQYLRQGSDCLNAKEANAMVTFYGKEAALRAAREQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9008; Mature: 9008
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYLYVLVACVLAACGQEYHTKAWYIEHDAERASRFKVCENDPAQYLRQGSDCLNAKEA CHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCCCCCCHHHHHHCCCHHCCCCCC NAMVTFYGKEAALRAAREQ CEEEEEECHHHHHHHHCCC >Mature Secondary Structure MKKYLYVLVACVLAACGQEYHTKAWYIEHDAERASRFKVCENDPAQYLRQGSDCLNAKEA CHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCCCCCCHHHHHHCCCHHCCCCCC NAMVTFYGKEAALRAAREQ CEEEEEECHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA