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The map label for this gene is yaaJ [C]

Identifier: 116688428

GI number: 116688428

Start: 454973

End: 456466

Strand: Direct

Name: yaaJ [C]

Synonym: Bcen2424_0404

Alternate gene names: 116688428

Gene position: 454973-456466 (Clockwise)

Preceding gene: 162227937

Following gene: 116688429

Centisome position: 13.06

GC content: 68.47

Gene sequence:

>1494_bases
ATGGAAGCATTCGTGCAAGGGCTGATCGAAGCCGTCAACGGCGTGCTGTGGAACTACGTGCTGATCGCGCTGCTGCTGGG
CGCCGGCGCGTGGTTCACGTTGCGGTTCCGGATGATCCAGCTGAAGGCGCTGTTCCTCAGCATGAAGCTGGTCGGCAGCA
AGGGCGAGCCGGGCAGCATCTCGTCGTTCCAGGCGTTCGCGACCGGGCTCGCGAGCCGCGTCGGCACCGGCAACATCGCC
GGCGTCGCGGTGGCGCTGACGGTCGGCGGCCCGGGCGCGATCTTCTGGATGTGGATGACCGCGCTCGTCGGGATGTCGTC
CGCGTTCGTCGAGGCGACGCTCGCGCAGATCTTCAAGGTGTCGCACCCGGACGGCAGCTATCGCGGCGGCCCCGCGTACT
ACATCCAGACGGGGCTGCGCTCGTGCGGCTTCGGCGTGCTGTTCTCGCTGTCGCTGATCCTCGCGTTCGGCTTCGTGTTC
AACGCGGTGCAGGCCAACGCGATCGCCGATGCGTTCCATACGTCGTTCGGCTGGCGTCGCGAGACGGTCGGCCTCGGTCT
CGTGCTGCTTTCCGCGCCGATCATCTTCGGCGGCATCCGCCGCATCGCGACGGTCGCGCAGGTGATCGTGCCGCTGATGG
CGATCGGCTACCTCGCGCTCGCGGTCTACGCGGTCGCGACGCACATCACGCTGGTGCCCGGCGTGATCGCGTTGATCGTG
AAGAGCGCGTTCGGCCTCGAGCAGGCGGCCGGCGGCCTGACCGGCTATGCGGTCAGCCAGGCGATCGCGATCGGCGTGAA
GCGCGGGCTGTTCTCGAACGAGGCGGGGATGGGCAGCGCGCCGAACGCGGCCGCGACCGCCAGCACGCGCCACCCCGTCA
CGCAGGGGCTGATCCAGATGCTCGGCGTGTTCGTCGACACGATCGTGATCTGCAGTGCGACCGCGTTCGTGATCCTGCTG
TCGGGCCAGTACGAACTCGGCACCGGGATGGAGGGCGCGGCGCTCACGCAGCGCGCGATTTCGAGCCACGTCGGCGACTG
GGGCGGCATCTACATGGCCGTCGCGATCTTCTTCCTCGCGTTCTCGTCGGTGATCGGCAACTACGCGTATGCGGAAGGCA
ACGTCGAATTCATCACGAAGCGGCGCGGCGTGCTGCCGCTGTTCCGCATCGCCGTGCTCGGCATGGTGATGTTCGGCAGC
GTCGGGCAACTGCCGCTCGTGTGGGCGATGGCCGATACGAGCATGGGCCTGATGGCGATCATCAACCTGATCGCGATCCT
CGCGCTCGGCAAGTACGCGCACGCCGCCTGGGCCGATTATCGCCGCCAGCGCGCGGCCGGCGTCGCCGATCCGGTGTTCA
CGCGCAACACGATCCCCGAACTCGCACGCGTGCTGCCGGCCGACGTGTGGGGCGAGCATGGCCCGCTGCCGCAGCGTCCG
GTTGCTTCCGCTGGCGCATCGAACGCGCCGCGGGCCGCCGCGAGCGAATCATGA

Upstream 100 bases:

>100_bases
TTCGTTTTGTAATAATCCTTGGGAACTGTCATATCATGTCGCCCCTCGGGCCGCGTTCGCGGCCGCCGCACATGACTGAC
GTTATTTACAAGGACTCTGG

Downstream 100 bases:

>100_bases
ACGGCGACCGGCTCCGTGCGTTCGTCGCGCTGATGCCCGATGCGGCATCGCGCGACGCGCTGCACGCGTTGCCGGTTACC
CGCGGGGCGCGGCGTACGCT

Product: amino acid carrier protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MEAFVQGLIEAVNGVLWNYVLIALLLGAGAWFTLRFRMIQLKALFLSMKLVGSKGEPGSISSFQAFATGLASRVGTGNIA
GVAVALTVGGPGAIFWMWMTALVGMSSAFVEATLAQIFKVSHPDGSYRGGPAYYIQTGLRSCGFGVLFSLSLILAFGFVF
NAVQANAIADAFHTSFGWRRETVGLGLVLLSAPIIFGGIRRIATVAQVIVPLMAIGYLALAVYAVATHITLVPGVIALIV
KSAFGLEQAAGGLTGYAVSQAIAIGVKRGLFSNEAGMGSAPNAAATASTRHPVTQGLIQMLGVFVDTIVICSATAFVILL
SGQYELGTGMEGAALTQRAISSHVGDWGGIYMAVAIFFLAFSSVIGNYAYAEGNVEFITKRRGVLPLFRIAVLGMVMFGS
VGQLPLVWAMADTSMGLMAIINLIAILALGKYAHAAWADYRRQRAAGVADPVFTRNTIPELARVLPADVWGEHGPLPQRP
VASAGASNAPRAAASES

Sequences:

>Translated_497_residues
MEAFVQGLIEAVNGVLWNYVLIALLLGAGAWFTLRFRMIQLKALFLSMKLVGSKGEPGSISSFQAFATGLASRVGTGNIA
GVAVALTVGGPGAIFWMWMTALVGMSSAFVEATLAQIFKVSHPDGSYRGGPAYYIQTGLRSCGFGVLFSLSLILAFGFVF
NAVQANAIADAFHTSFGWRRETVGLGLVLLSAPIIFGGIRRIATVAQVIVPLMAIGYLALAVYAVATHITLVPGVIALIV
KSAFGLEQAAGGLTGYAVSQAIAIGVKRGLFSNEAGMGSAPNAAATASTRHPVTQGLIQMLGVFVDTIVICSATAFVILL
SGQYELGTGMEGAALTQRAISSHVGDWGGIYMAVAIFFLAFSSVIGNYAYAEGNVEFITKRRGVLPLFRIAVLGMVMFGS
VGQLPLVWAMADTSMGLMAIINLIAILALGKYAHAAWADYRRQRAAGVADPVFTRNTIPELARVLPADVWGEHGPLPQRP
VASAGASNAPRAAASES
>Mature_497_residues
MEAFVQGLIEAVNGVLWNYVLIALLLGAGAWFTLRFRMIQLKALFLSMKLVGSKGEPGSISSFQAFATGLASRVGTGNIA
GVAVALTVGGPGAIFWMWMTALVGMSSAFVEATLAQIFKVSHPDGSYRGGPAYYIQTGLRSCGFGVLFSLSLILAFGFVF
NAVQANAIADAFHTSFGWRRETVGLGLVLLSAPIIFGGIRRIATVAQVIVPLMAIGYLALAVYAVATHITLVPGVIALIV
KSAFGLEQAAGGLTGYAVSQAIAIGVKRGLFSNEAGMGSAPNAAATASTRHPVTQGLIQMLGVFVDTIVICSATAFVILL
SGQYELGTGMEGAALTQRAISSHVGDWGGIYMAVAIFFLAFSSVIGNYAYAEGNVEFITKRRGVLPLFRIAVLGMVMFGS
VGQLPLVWAMADTSMGLMAIINLIAILALGKYAHAAWADYRRQRAAGVADPVFTRNTIPELARVLPADVWGEHGPLPQRP
VASAGASNAPRAAASES

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=466, Percent_Identity=42.7038626609442, Blast_Score=350, Evalue=1e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 51960; Mature: 51960

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]