| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688414
Identifier: 116688414
GI number: 116688414
Start: 435693
End: 436559
Strand: Direct
Name: 116688414
Synonym: Bcen2424_0390
Alternate gene names: NA
Gene position: 435693-436559 (Clockwise)
Preceding gene: 116688413
Following gene: 116688415
Centisome position: 12.51
GC content: 74.16
Gene sequence:
>867_bases ATGACCGCGCTCGTGCATCGGCCGGCGCTGCGCGGAGGCGCCGGGTCGGGCGGCCTGCCGCGCGTGTCGCCGGCGGCCGT GCATGCCACGGGGTGTGTACTGGCATTCGTGGCCGTGCTGGCTGGCGGCATTCATCTGGCGAATGCCGCCGACTGGAGCG GGCTGACCCATAGTCGCGCGTTGCTCGCCGCAGCGCAGGCGCGCGCGGCCGACGCGCAGCGTATGCTCGCTGCCGCGGGA CAACGACGCGACGGACATCGTGCGTCGACGCGCGACGATCATTCGCCGCATGCGCCGGAATGGGCGGCACTGATGCTGGA ACTGGCCGATCTCGCCGCGTCGAGCGGGCTGCGCGGCGTATCGATCGAACCGCAGCGCGCCGATGGCGCGGAACCGGATG GCCGGCGCACCGTGCACATCGCCGCGGATGGCGATTTTCGCGCGCTGCTGCACATGGTTGGCGGGCTCGCGCGCTTCCCG GTGCTGGCGGTACCGACGGCGCTGCGTATCGAGCGTGGCATGGCGGCGGCGCGGGTGGACATGTCCGTCGACGTGTTTCC AGCGCTGCCGGCGACAGCGGTCGCGGCGGACAACACGCCGGTTCGCGCGGCGGCGCCCGACGCCGATCCGTTCGGCGAGG CTGGCCCGGCCGAAGCGGCGGGGCACGCGGCGCGCTTTGCCGGCACGATTCGCGACGCGCGCGCCGGTCTCGCGTTGTTC GACGACGGCGATGGCGTGTTCACCGCCGTCGCGCCTGGCGACCTGCTCGGGGCCGCGCGCGTGGTGCGCGTCGAGCGCGC GGCCGTGACGCTTGCGACGGCGGACGGAGCGCAGCGGCTCGTCCTGGACGACGGAGGCCGGCCATGA
Upstream 100 bases:
>100_bases CGGACGCGCCGGCTGCCACGGCCTGGATGCCGTTCCGGTTCTCGGTGCAGTTGCGCTGGCACGACGCGATGTCGTCGCGG ACGGTGTCGGGAGGTGGCGC
Downstream 100 bases:
>100_bases CGAAACACGGCTGTTGGCTATTTGCCATCTGGGCCGGGGTGACGGCGGCCGACGCCGGCGCGTCGTTGCCGCCGCTGCCC GCGGTCTGGCCCGCCGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MTALVHRPALRGGAGSGGLPRVSPAAVHATGCVLAFVAVLAGGIHLANAADWSGLTHSRALLAAAQARAADAQRMLAAAG QRRDGHRASTRDDHSPHAPEWAALMLELADLAASSGLRGVSIEPQRADGAEPDGRRTVHIAADGDFRALLHMVGGLARFP VLAVPTALRIERGMAAARVDMSVDVFPALPATAVAADNTPVRAAAPDADPFGEAGPAEAAGHAARFAGTIRDARAGLALF DDGDGVFTAVAPGDLLGAARVVRVERAAVTLATADGAQRLVLDDGGRP
Sequences:
>Translated_288_residues MTALVHRPALRGGAGSGGLPRVSPAAVHATGCVLAFVAVLAGGIHLANAADWSGLTHSRALLAAAQARAADAQRMLAAAG QRRDGHRASTRDDHSPHAPEWAALMLELADLAASSGLRGVSIEPQRADGAEPDGRRTVHIAADGDFRALLHMVGGLARFP VLAVPTALRIERGMAAARVDMSVDVFPALPATAVAADNTPVRAAAPDADPFGEAGPAEAAGHAARFAGTIRDARAGLALF DDGDGVFTAVAPGDLLGAARVVRVERAAVTLATADGAQRLVLDDGGRP >Mature_287_residues TALVHRPALRGGAGSGGLPRVSPAAVHATGCVLAFVAVLAGGIHLANAADWSGLTHSRALLAAAQARAADAQRMLAAAGQ RRDGHRASTRDDHSPHAPEWAALMLELADLAASSGLRGVSIEPQRADGAEPDGRRTVHIAADGDFRALLHMVGGLARFPV LAVPTALRIERGMAAARVDMSVDVFPALPATAVAADNTPVRAAAPDADPFGEAGPAEAAGHAARFAGTIRDARAGLALFD DGDGVFTAVAPGDLLGAARVVRVERAAVTLATADGAQRLVLDDGGRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29174; Mature: 29043
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALVHRPALRGGAGSGGLPRVSPAAVHATGCVLAFVAVLAGGIHLANAADWSGLTHSRA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHH LLAAAQARAADAQRMLAAAGQRRDGHRASTRDDHSPHAPEWAALMLELADLAASSGLRGV HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC SIEPQRADGAEPDGRRTVHIAADGDFRALLHMVGGLARFPVLAVPTALRIERGMAAARVD CCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCHHHCCHHHHHHHCCCEEEEC MSVDVFPALPATAVAADNTPVRAAAPDADPFGEAGPAEAAGHAARFAGTIRDARAGLALF CEEEECCCCCCCEEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEE DDGDGVFTAVAPGDLLGAARVVRVERAAVTLATADGAQRLVLDDGGRP ECCCCEEEEECCCHHHHHHHHHEEHHHEEEEEECCCCCEEEECCCCCC >Mature Secondary Structure TALVHRPALRGGAGSGGLPRVSPAAVHATGCVLAFVAVLAGGIHLANAADWSGLTHSRA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHH LLAAAQARAADAQRMLAAAGQRRDGHRASTRDDHSPHAPEWAALMLELADLAASSGLRGV HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC SIEPQRADGAEPDGRRTVHIAADGDFRALLHMVGGLARFPVLAVPTALRIERGMAAARVD CCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCHHHCCHHHHHHHCCCEEEEC MSVDVFPALPATAVAADNTPVRAAAPDADPFGEAGPAEAAGHAARFAGTIRDARAGLALF CEEEECCCCCCCEEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEE DDGDGVFTAVAPGDLLGAARVVRVERAAVTLATADGAQRLVLDDGGRP ECCCCEEEEECCCHHHHHHHHHEEHHHEEEEEECCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA