| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688356
Identifier: 116688356
GI number: 116688356
Start: 383081
End: 383536
Strand: Reverse
Name: 116688356
Synonym: Bcen2424_0332
Alternate gene names: NA
Gene position: 383536-383081 (Counterclockwise)
Preceding gene: 116688402
Following gene: 116688354
Centisome position: 11.01
GC content: 61.84
Gene sequence:
>456_bases ATGGTGAAGCAGACGCCTGATGCGGGATGCCCGGGTTTGGCGCACGTCGGCTTGCGCAGCACGACCGATGAATCGAGATG CCGTGGCCCGACCACGTCCCGCAGGATGAATCCGGCGATTCTCTACGCATGCGCTATAGCCGACGACGCGCGCCAGGTCC AAGCATCCCTACGACCCTGCTGCTGCCGCGTCGAATGCTGCTGCTTGGCACCGACGCATCTCGTCGTGCAACCGGCTCAC GTCAGTACGTGGTCGCTCATCGCAGCAGATCTTCGGCGTACACGCGATATCGCAACCGCTCTTATGCGCCGTCTCGTCCA ACTGAACGCGATTCTCCGTGTCGGATTCTACGTAGGCGCCTTGCCACACCTCACGTTCCCCAAGACGATGGAGAGCCGAT GGGTGTCACCGAAGCATCGACATCCGACATACGCTGCGCGGCAATGCTCGAGCTGA
Upstream 100 bases:
>100_bases GCGCCTGCCGGGTCCCCGCTGGTGACGGTCCGACAGCCAGGCCCTGCTTACGGCCCCACCGCGCAGCGCCAAGGGCATAC TCGACGCCGGGCAAGTATCA
Downstream 100 bases:
>100_bases CCGGGAATCAAGACCTGGGGCACCGTGCACCAGCTTCCGCCAGCAGGAGACTCTCCGTCCGGCGATCCGAATACGGCATG CACGGAACGTGCGTCAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MVKQTPDAGCPGLAHVGLRSTTDESRCRGPTTSRRMNPAILYACAIADDARQVQASLRPCCCRVECCCLAPTHLVVQPAH VSTWSLIAADLRRTRDIATALMRRLVQLNAILRVGFYVGALPHLTFPKTMESRWVSPKHRHPTYAARQCSS
Sequences:
>Translated_151_residues MVKQTPDAGCPGLAHVGLRSTTDESRCRGPTTSRRMNPAILYACAIADDARQVQASLRPCCCRVECCCLAPTHLVVQPAH VSTWSLIAADLRRTRDIATALMRRLVQLNAILRVGFYVGALPHLTFPKTMESRWVSPKHRHPTYAARQCSS >Mature_151_residues MVKQTPDAGCPGLAHVGLRSTTDESRCRGPTTSRRMNPAILYACAIADDARQVQASLRPCCCRVECCCLAPTHLVVQPAH VSTWSLIAADLRRTRDIATALMRRLVQLNAILRVGFYVGALPHLTFPKTMESRWVSPKHRHPTYAARQCSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16683; Mature: 16683
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 6.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKQTPDAGCPGLAHVGLRSTTDESRCRGPTTSRRMNPAILYACAIADDARQVQASLRPC CCCCCCCCCCCCHHHCCCCCCCCHHHCCCCCCCCCCCHHHEEEEHHHHHHHHHHHHHCHH CCRVECCCLAPTHLVVQPAHVSTWSLIAADLRRTRDIATALMRRLVQLNAILRVGFYVGA HHHHHHHHCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPHLTFPKTMESRWVSPKHRHPTYAARQCSS CCCCCCCCCHHHHCCCCCCCCCCHHHHCCCC >Mature Secondary Structure MVKQTPDAGCPGLAHVGLRSTTDESRCRGPTTSRRMNPAILYACAIADDARQVQASLRPC CCCCCCCCCCCCHHHCCCCCCCCHHHCCCCCCCCCCCHHHEEEEHHHHHHHHHHHHHCHH CCRVECCCLAPTHLVVQPAHVSTWSLIAADLRRTRDIATALMRRLVQLNAILRVGFYVGA HHHHHHHHCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPHLTFPKTMESRWVSPKHRHPTYAARQCSS CCCCCCCCCHHHHCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA