| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is pyrE [H]
Identifier: 116688341
GI number: 116688341
Start: 358929
End: 359615
Strand: Reverse
Name: pyrE [H]
Synonym: Bcen2424_0317
Alternate gene names: 116688341
Gene position: 359615-358929 (Counterclockwise)
Preceding gene: 116688343
Following gene: 116688340
Centisome position: 10.32
GC content: 62.88
Gene sequence:
>687_bases ATGACAGGCTACGATCGTCAGTCGATCTCGGATACGACCGCCAAAATCCTGCTCGAAGTGCAGGCGGTGCACTTCAATGC CGAAAAACCGTTCATCTTCACGTCCGGCTGGGCAAGCCCCGTCTATATCGACTGCCGCAAGCTGATCTCGTATCCGCGCG TGCGCCGTGCGCTGATGGAAATGGCGGAAACGACGATCACGCGCGACATCGGCTTCGAGCAGATCGACGCGGTGGCGGGC GGCGAGACGGCCGGCATCCCGTTCGCGGCATGGATCGCGGACCGGATGATGGTGCCGATGCAGTACGTGCGTAAAAAGCC GAAGGGTTTCGGCCGCAACGCGCAGATCGAAGGCCATCTGGAAGAAGGCTCGCGCGTGCTGCTGGTGGAAGACCTGACCA CCGACAGCCGCAGCAAGATCAACTTCGTCAACGCGCTGCGCACCGCGGGCGCGACGGTGAACCACTGCTTCGTGCTGTTC CACTACGACATCTTCAAGGAAAGCGTGTCGGTCCTGAAGGACATCGACGTCGACCTGCACGCGCTCGCGACGTGGTGGGA CGTGCTGCGCGTCGCGAAGGCGTCGGGCTACTTCGAGACGAAGACGCTCGACGAAGTCGAGAAATTCCTGCACGCACCGG CCGAATGGTCGGCCGCGCACGGCGGCGCGACGGCCCCGAAGGAATGA
Upstream 100 bases:
>100_bases GCGATTGGTCCGCCGATCGCGCCCCGGCCCTTCGGGCAGGTTCCCCTTGCTGCGCCACCGGGCCCGCGCCCGCTCCTCGC TCATCACCCAAGGAATGCCC
Downstream 100 bases:
>100_bases CGCCACGCCGGCACGCGTGCCGGCGCACTGGCCAGGAAAACCGCCTGCTTGATCGCAGGCGGTTTTTTTTCGTCCGTCGA CCGGCGCGCTGACCGATCGC
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase [H]
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MTGYDRQSISDTTAKILLEVQAVHFNAEKPFIFTSGWASPVYIDCRKLISYPRVRRALMEMAETTITRDIGFEQIDAVAG GETAGIPFAAWIADRMMVPMQYVRKKPKGFGRNAQIEGHLEEGSRVLLVEDLTTDSRSKINFVNALRTAGATVNHCFVLF HYDIFKESVSVLKDIDVDLHALATWWDVLRVAKASGYFETKTLDEVEKFLHAPAEWSAAHGGATAPKE
Sequences:
>Translated_228_residues MTGYDRQSISDTTAKILLEVQAVHFNAEKPFIFTSGWASPVYIDCRKLISYPRVRRALMEMAETTITRDIGFEQIDAVAG GETAGIPFAAWIADRMMVPMQYVRKKPKGFGRNAQIEGHLEEGSRVLLVEDLTTDSRSKINFVNALRTAGATVNHCFVLF HYDIFKESVSVLKDIDVDLHALATWWDVLRVAKASGYFETKTLDEVEKFLHAPAEWSAAHGGATAPKE >Mature_227_residues TGYDRQSISDTTAKILLEVQAVHFNAEKPFIFTSGWASPVYIDCRKLISYPRVRRALMEMAETTITRDIGFEQIDAVAGG ETAGIPFAAWIADRMMVPMQYVRKKPKGFGRNAQIEGHLEEGSRVLLVEDLTTDSRSKINFVNALRTAGATVNHCFVLFH YDIFKESVSVLKDIDVDLHALATWWDVLRVAKASGYFETKTLDEVEKFLHAPAEWSAAHGGATAPKE
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) [H]
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily [H]
Homologues:
Organism=Homo sapiens, GI4507835, Length=218, Percent_Identity=28.4403669724771, Blast_Score=89, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17508631, Length=131, Percent_Identity=35.1145038167939, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17554964, Length=169, Percent_Identity=27.810650887574, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI17933654, Length=198, Percent_Identity=28.2828282828283, Blast_Score=67, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004467 - InterPro: IPR023031 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.10 [H]
Molecular weight: Translated: 25498; Mature: 25367
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGYDRQSISDTTAKILLEVQAVHFNAEKPFIFTSGWASPVYIDCRKLISYPRVRRALME CCCCCCCHHHHHHHHHHHHHHEEEECCCCCEEEECCCCCCHHHHHHHHHCCHHHHHHHHH MAETTITRDIGFEQIDAVAGGETAGIPFAAWIADRMMVPMQYVRKKPKGFGRNAQIEGHL HHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE EEGSRVLLVEDLTTDSRSKINFVNALRTAGATVNHCFVLFHYDIFKESVSVLKDIDVDLH CCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHEEEEEHHHHHHHHHHHHHHCCCHHH ALATWWDVLRVAKASGYFETKTLDEVEKFLHAPAEWSAAHGGATAPKE HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TGYDRQSISDTTAKILLEVQAVHFNAEKPFIFTSGWASPVYIDCRKLISYPRVRRALME CCCCCCHHHHHHHHHHHHHHEEEECCCCCEEEECCCCCCHHHHHHHHHCCHHHHHHHHH MAETTITRDIGFEQIDAVAGGETAGIPFAAWIADRMMVPMQYVRKKPKGFGRNAQIEGHL HHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE EEGSRVLLVEDLTTDSRSKINFVNALRTAGATVNHCFVLFHYDIFKESVSVLKDIDVDLH CCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHEEEEEHHHHHHHHHHHHHHCCCHHH ALATWWDVLRVAKASGYFETKTLDEVEKFLHAPAEWSAAHGGATAPKE HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA