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The map label for this gene is ybcL [H]

Identifier: 116688340

GI number: 116688340

Start: 358092

End: 358688

Strand: Reverse

Name: ybcL [H]

Synonym: Bcen2424_0316

Alternate gene names: 116688340

Gene position: 358688-358092 (Counterclockwise)

Preceding gene: 116688341

Following gene: 116688339

Centisome position: 10.3

GC content: 72.36

Gene sequence:

>597_bases
ATGCGTGTGGATCGCCGGATCACTCCGCCTGCGCCATCGGGTCGTCCTTCTCCGTTTCTCCTCTCCGCCCTCCTGTGCGC
CGCCGTTTTCGCGGCGCTGCCCGCGCGTGCCGAAGGCCCGTTCACCGTGACGAGCGACGACCTGACGCCCGGCGCGCGCG
TGCGGCTCGCGAACGTGTTCGATCGCGGCGACTGCAAGGGCGCGAACCGCTCGCCGCAACTCGCATGGCACAACCCGCCG
CCCGGCACGCGCGGCTATGCGGTCACGATCTTCGATCCCGACGCGCCCGGGCACGGCTGGTGGCACTGGGCCGTCGCGGG
CATCCCGGCGACCGTCACGAGCCTGCCGGCCGACGCCAGCGCCTCCGGCTTCCTGCGCCGCATCGGCGCGAGCGAGGCGC
GCAACGACTTCGGGCTCGACGGCTACGGCGGCCCGTGCCCGCCGCCCGGCAAGCCGCATCGCTACGTGATCACCGTCTAC
GCGCTGAAAGGCACCGACCTGCGCGTCTCGCAGGGCCGCCCTGCGCCGATGTTCGAGCACGAGATCGGCACGCTCGCGAT
CGGCACCGCGCAACTCACGGTCACTTACGGGCAGTAG

Upstream 100 bases:

>100_bases
GCTAGACTTGATCCATCGCCGCCCTCAGCGCTGCGGGCAACATACAACGCCAACAATGCCGGGCGGTTCGGCCCGGCCCA
CGTGACGGGAGAAGCGCCAT

Downstream 100 bases:

>100_bases
CCACGTCCTGCGGGGCACCGCCGCCGCGATTGCCGGCCACCGCGAATTTCAGTGCGCCGCGCACGCACGTTGTCTCGTCA
TTTCGGCTTGCTAGACTCGT

Product: YbhB and YbcL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MRVDRRITPPAPSGRPSPFLLSALLCAAVFAALPARAEGPFTVTSDDLTPGARVRLANVFDRGDCKGANRSPQLAWHNPP
PGTRGYAVTIFDPDAPGHGWWHWAVAGIPATVTSLPADASASGFLRRIGASEARNDFGLDGYGGPCPPPGKPHRYVITVY
ALKGTDLRVSQGRPAPMFEHEIGTLAIGTAQLTVTYGQ

Sequences:

>Translated_198_residues
MRVDRRITPPAPSGRPSPFLLSALLCAAVFAALPARAEGPFTVTSDDLTPGARVRLANVFDRGDCKGANRSPQLAWHNPP
PGTRGYAVTIFDPDAPGHGWWHWAVAGIPATVTSLPADASASGFLRRIGASEARNDFGLDGYGGPCPPPGKPHRYVITVY
ALKGTDLRVSQGRPAPMFEHEIGTLAIGTAQLTVTYGQ
>Mature_198_residues
MRVDRRITPPAPSGRPSPFLLSALLCAAVFAALPARAEGPFTVTSDDLTPGARVRLANVFDRGDCKGANRSPQLAWHNPP
PGTRGYAVTIFDPDAPGHGWWHWAVAGIPATVTSLPADASASGFLRRIGASEARNDFGLDGYGGPCPPPGKPHRYVITVY
ALKGTDLRVSQGRPAPMFEHEIGTLAIGTAQLTVTYGQ

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=180, Percent_Identity=41.6666666666667, Blast_Score=140, Evalue=5e-35,
Organism=Escherichia coli, GI1786990, Length=155, Percent_Identity=36.7741935483871, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 20951; Mature: 20951

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVDRRITPPAPSGRPSPFLLSALLCAAVFAALPARAEGPFTVTSDDLTPGARVRLANVF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEEEEE
DRGDCKGANRSPQLAWHNPPPGTRGYAVTIFDPDAPGHGWWHWAVAGIPATVTSLPADAS
CCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCEEECCCCCCCC
ASGFLRRIGASEARNDFGLDGYGGPCPPPGKPHRYVITVYALKGTDLRVSQGRPAPMFEH
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCCCCCCCC
EIGTLAIGTAQLTVTYGQ
CCCEEEEEEEEEEEEECC
>Mature Secondary Structure
MRVDRRITPPAPSGRPSPFLLSALLCAAVFAALPARAEGPFTVTSDDLTPGARVRLANVF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEEEEE
DRGDCKGANRSPQLAWHNPPPGTRGYAVTIFDPDAPGHGWWHWAVAGIPATVTSLPADAS
CCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCEEECCCCCCCC
ASGFLRRIGASEARNDFGLDGYGGPCPPPGKPHRYVITVYALKGTDLRVSQGRPAPMFEH
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCCCCCCCC
EIGTLAIGTAQLTVTYGQ
CCCEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 11439028 [H]