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The map label for this gene is cyt [H]

Identifier: 116688317

GI number: 116688317

Start: 334184

End: 334537

Strand: Direct

Name: cyt [H]

Synonym: Bcen2424_0293

Alternate gene names: 116688317

Gene position: 334184-334537 (Clockwise)

Preceding gene: 116688316

Following gene: 116688322

Centisome position: 9.59

GC content: 70.34

Gene sequence:

>354_bases
ATGACGGGCATGCAGATGAAACGATGGATGGTGCAGGGCGCCGCGGCCGCGGCGCTCGTGGCCGGCACGCTGGGCGCCGC
GCACGCGGACGTCGGCGACGGCCTGAAAGTCGCGCGCAGCAACGCGTGCATGGGCTGCCACGCGGTCGACCGCAAGCTCG
TCGGGCCGTCGTTCAAGGATATCGCCGCGCGCTACAAGTCCGATCCGCAGGCCGTCGCGAAGCTGTCGAAGAAAGTGAAG
GACGGCGGCTCGGGCGTGTGGGGCGCGATTCCGATGCCGGCGCATCCGCGCATGAGCGACGCCGACGTCCGGTCGGTGGT
CGAATGGGTGCTGGCCGGCGCGCCGTCGAAGTAA

Upstream 100 bases:

>100_bases
CGGTGCCCGACGCATCGGTGCAGTCCGCGCCGCTGCAGCCGCCCGCGCCGATCTCGAATTCGTCGAACGTGCATCCGGGC
AATCCGAAGGCGAAGGCGCA

Downstream 100 bases:

>100_bases
GGTTTCAGGGGCGATTCAACCCCCTATTGCCAAGCGCAGAAATGCGTGTGTATGATAGTTGACTGATGGGGCGGTAGCTC
AGCTGGGAGAGCGTCGCGTT

Product: cytochrome c, class I

Products: NA

Alternate protein names: Cytochrome c-551; Cytochrome c552 [H]

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MTGMQMKRWMVQGAAAAALVAGTLGAAHADVGDGLKVARSNACMGCHAVDRKLVGPSFKDIAARYKSDPQAVAKLSKKVK
DGGSGVWGAIPMPAHPRMSDADVRSVVEWVLAGAPSK

Sequences:

>Translated_117_residues
MTGMQMKRWMVQGAAAAALVAGTLGAAHADVGDGLKVARSNACMGCHAVDRKLVGPSFKDIAARYKSDPQAVAKLSKKVK
DGGSGVWGAIPMPAHPRMSDADVRSVVEWVLAGAPSK
>Mature_116_residues
TGMQMKRWMVQGAAAAALVAGTLGAAHADVGDGLKVARSNACMGCHAVDRKLVGPSFKDIAARYKSDPQAVAKLSKKVKD
GGSGVWGAIPMPAHPRMSDADVRSVVEWVLAGAPSK

Specific function: Monoheme c-type cytochrome. Probable electron donor to membrane cytochrome oxidase and to periplasmic nitrite reductase [H]

COG id: COG4654

COG function: function code C; Cytochrome c551/c552

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002324 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 12100; Mature: 11969

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGMQMKRWMVQGAAAAALVAGTLGAAHADVGDGLKVARSNACMGCHAVDRKLVGPSFKD
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCHHH
IAARYKSDPQAVAKLSKKVKDGGSGVWGAIPMPAHPRMSDADVRSVVEWVLAGAPSK
HHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TGMQMKRWMVQGAAAAALVAGTLGAAHADVGDGLKVARSNACMGCHAVDRKLVGPSFKD
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCHHH
IAARYKSDPQAVAKLSKKVKDGGSGVWGAIPMPAHPRMSDADVRSVVEWVLAGAPSK
HHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9746537; 12700255 [H]