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The map label for this gene is yraN [C]

Identifier: 116688314

GI number: 116688314

Start: 332172

End: 332648

Strand: Direct

Name: yraN [C]

Synonym: Bcen2424_0290

Alternate gene names: 116688314

Gene position: 332172-332648 (Clockwise)

Preceding gene: 116688312

Following gene: 116688315

Centisome position: 9.53

GC content: 72.54

Gene sequence:

>477_bases
ATGGCAGGCAATGCACGCGGTCGCGGCACGAACGGAACAAGGACGGCATTGTGCCACGCGGCGCCGGCCCGGCCGGAGGG
CGCGCGCGGTCGGCCGCCTTCGGGCGACAACTTTTCCGGCGCGGCGCGATCCAAACCGGTCGGCGCGGCGTTCGAGCAGC
GCGCGCGGCAGTTTCTCGAGCGTCATGGCCTCGGATTCGTCGCCGCGAACGTGACGATGCGCGGCGGCGAGCTCGATCTC
GTGATGCGCGAGCCCGACGGCATGCTCGTGTTCGTCGAAGTGCGCGCGCGGCGCAGTACCCGGCACGGCGGTGCGACCGC
GAGCGTCGGCTGGCGCAAGCGGCGGCGTCTGGTCGCGGCCGCGTTGCAGTTCTGGTCGCGGCACGGTGCGGGCGCCGCGT
GCCGTTTCGACGTCGTCGCGTTCGAGGCCGGCCGGCTTGCGTGGCTGCGCGACGCATTTCGTACCGACGATGCGTAG

Upstream 100 bases:

>100_bases
GCGCAGCGTGATGTCGGCCGTATTGCCGATCGGTGTGGCGACCACGTAGAGCGTGGCGTCCGGGTAGTGCTGCGTATGCG
CGAGTTCGAGGAGGGCAGTC

Downstream 100 bases:

>100_bases
CCGCGAGCTGTGACGAGATGTAAAGAGTTCTTGCCGGACCCCCGGAGAGGGCGCCGGAGTACGGTAAACTCGCCGCACCC
ACGATGTCGCGCGAGTTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MAGNARGRGTNGTRTALCHAAPARPEGARGRPPSGDNFSGAARSKPVGAAFEQRARQFLERHGLGFVAANVTMRGGELDL
VMREPDGMLVFVEVRARRSTRHGGATASVGWRKRRRLVAAALQFWSRHGAGAACRFDVVAFEAGRLAWLRDAFRTDDA

Sequences:

>Translated_158_residues
MAGNARGRGTNGTRTALCHAAPARPEGARGRPPSGDNFSGAARSKPVGAAFEQRARQFLERHGLGFVAANVTMRGGELDL
VMREPDGMLVFVEVRARRSTRHGGATASVGWRKRRRLVAAALQFWSRHGAGAACRFDVVAFEAGRLAWLRDAFRTDDA
>Mature_157_residues
AGNARGRGTNGTRTALCHAAPARPEGARGRPPSGDNFSGAARSKPVGAAFEQRARQFLERHGLGFVAANVTMRGGELDLV
MREPDGMLVFVEVRARRSTRHGGATASVGWRKRRRLVAAALQFWSRHGAGAACRFDVVAFEAGRLAWLRDAFRTDDA

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

Organism=Escherichia coli, GI1789538, Length=113, Percent_Identity=48.6725663716814, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 17059; Mature: 16927

Theoretical pI: Translated: 12.18; Mature: 12.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGNARGRGTNGTRTALCHAAPARPEGARGRPPSGDNFSGAARSKPVGAAFEQRARQFLE
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
RHGLGFVAANVTMRGGELDLVMREPDGMLVFVEVRARRSTRHGGATASVGWRKRRRLVAA
HCCCEEEEEEEEEECCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
ALQFWSRHGAGAACRFDVVAFEAGRLAWLRDAFRTDDA
HHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
AGNARGRGTNGTRTALCHAAPARPEGARGRPPSGDNFSGAARSKPVGAAFEQRARQFLE
CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
RHGLGFVAANVTMRGGELDLVMREPDGMLVFVEVRARRSTRHGGATASVGWRKRRRLVAA
HCCCEEEEEEEEEECCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
ALQFWSRHGAGAACRFDVVAFEAGRLAWLRDAFRTDDA
HHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA