| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688304
Identifier: 116688304
GI number: 116688304
Start: 323442
End: 324101
Strand: Direct
Name: 116688304
Synonym: Bcen2424_0280
Alternate gene names: NA
Gene position: 323442-324101 (Clockwise)
Preceding gene: 116688302
Following gene: 116688305
Centisome position: 9.28
GC content: 69.39
Gene sequence:
>660_bases TTGAACATCGATCCCGCCTTCGCCCTGCATCTGCTGCATCGCTGCGCGCTCGGCACGCTCGCCACCCATACGCGCGAGCC GCAGGGCTTTCCGTATCCGACCGTCGTGCCGTTTGCACCCGATGCAAGCCATCGGCCGGTGATCCTCGTGAGCGGCCTGG CCGAGCACACGCGCAATCTCGCCGCCGATCCGCGTGCGGGTTTCCTCATCGTCGACGCAAGCGACGGCGATGTCCTGAAC GCCGAGCGCGCGACGCTGCTGGGCCGGTTCGTGCCGCTAGGCGACGATCCGCACGTCACCGCGCGCTACCTGCGCTACGA GCCGGACGCCGCGCGCTATCTCGCGCTCGGCGATTTCGCGTTCTGGGCGCTCGAGATCGAGCGGCTGCGCTATATCGGCG GGTTCGGGCGAATGGGCTGGGTCGACGGCACGCAGCTCGATACGCTGCCGCCGCTCGCGTTCGACGACGAACAGGCGCTG TGGCACGCCTACGAGGCGGGCGACGCACACCGCGACGGGCTCGACCTGCTCGGCGTCGATCGCCATGGCGCCGACTGGCG ATGCGACGGTCGCCGGGTGCGCACGCCGTTCGAGTCGCCATCGGCCGATACCGGTGCATTGCGCGAGCGGCTGATCGCCT GCGCAAAGGATGTGACGTGA
Upstream 100 bases:
>100_bases CGCCGGCCGTTCGGCCGATGCGCGGCGCGCGGCGCCAGCGGGTAACATCAACGCGCATGCGGCATGCCCGACGCGCCGCC TTTCGACCGCAGGAGTCCGC
Downstream 100 bases:
>100_bases CGTCGCGGGTCAGCGATTTGTCCGTTTAGCAAACCGCGTCATGTGGTTTTCGCAAAACTGTCGTCCGATGAAAGCTTTGA TTTTTTCGAATGCAGGGTAA
Product: pyridoxamine 5'-phosphate oxidase-related, FMN-binding
Products: NA
Alternate protein names: Heme Iron Utilization Protein; Pyridoxamine Oxidase Protein; FMN Flavoprotein; Pyridoxamine 5-Phosphate Oxidase; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxamine 5prime-Phosphate Oxidase-Related Protein
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MNIDPAFALHLLHRCALGTLATHTREPQGFPYPTVVPFAPDASHRPVILVSGLAEHTRNLAADPRAGFLIVDASDGDVLN AERATLLGRFVPLGDDPHVTARYLRYEPDAARYLALGDFAFWALEIERLRYIGGFGRMGWVDGTQLDTLPPLAFDDEQAL WHAYEAGDAHRDGLDLLGVDRHGADWRCDGRRVRTPFESPSADTGALRERLIACAKDVT
Sequences:
>Translated_219_residues MNIDPAFALHLLHRCALGTLATHTREPQGFPYPTVVPFAPDASHRPVILVSGLAEHTRNLAADPRAGFLIVDASDGDVLN AERATLLGRFVPLGDDPHVTARYLRYEPDAARYLALGDFAFWALEIERLRYIGGFGRMGWVDGTQLDTLPPLAFDDEQAL WHAYEAGDAHRDGLDLLGVDRHGADWRCDGRRVRTPFESPSADTGALRERLIACAKDVT >Mature_219_residues MNIDPAFALHLLHRCALGTLATHTREPQGFPYPTVVPFAPDASHRPVILVSGLAEHTRNLAADPRAGFLIVDASDGDVLN AERATLLGRFVPLGDDPHVTARYLRYEPDAARYLALGDFAFWALEIERLRYIGGFGRMGWVDGTQLDTLPPLAFDDEQAL WHAYEAGDAHRDGLDLLGVDRHGADWRCDGRRVRTPFESPSADTGALRERLIACAKDVT
Specific function: Unknown
COG id: COG0748
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24152; Mature: 24152
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIDPAFALHLLHRCALGTLATHTREPQGFPYPTVVPFAPDASHRPVILVSGLAEHTRNL CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEECCHHHHHHHC AADPRAGFLIVDASDGDVLNAERATLLGRFVPLGDDPHVTARYLRYEPDAARYLALGDFA CCCCCCCEEEEECCCCCEECHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHEEEEECCHH FWALEIERLRYIGGFGRMGWVDGTQLDTLPPLAFDDEQALWHAYEAGDAHRDGLDLLGVD HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEC RHGADWRCDGRRVRTPFESPSADTGALRERLIACAKDVT CCCCCCEECCCEECCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MNIDPAFALHLLHRCALGTLATHTREPQGFPYPTVVPFAPDASHRPVILVSGLAEHTRNL CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEECCHHHHHHHC AADPRAGFLIVDASDGDVLNAERATLLGRFVPLGDDPHVTARYLRYEPDAARYLALGDFA CCCCCCCEEEEECCCCCEECHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHEEEEECCHH FWALEIERLRYIGGFGRMGWVDGTQLDTLPPLAFDDEQALWHAYEAGDAHRDGLDLLGVD HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEC RHGADWRCDGRRVRTPFESPSADTGALRERLIACAKDVT CCCCCCEECCCEECCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA