| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is livK [C]
Identifier: 116688302
GI number: 116688302
Start: 320762
End: 321937
Strand: Direct
Name: livK [C]
Synonym: Bcen2424_0278
Alternate gene names: 116688302
Gene position: 320762-321937 (Clockwise)
Preceding gene: 116688301
Following gene: 116688304
Centisome position: 9.21
GC content: 63.35
Gene sequence:
>1176_bases ATGGCGTTTTTTGGGACCGAACTGGAGACTTACATGAATATCAAGATGCAAAAGCTGTTGCCGATCACCGCGGCAGCGAT GCTGTGCGCTGCAGCTGCAAGCAACGCGTCCGCCGATCAAGTCGTCAAGATCGGCCACGTCGCGCCGTTGACGGGCGGCA TTGCACACCTGGGCAAGGACAACGAAAACGGTGCACGTCTCGCAGTCGAGGAGATCAACGCGAAGGGCCTCACGATCGGC GGCCAGAAGATCACGCTGCAACTCGACCCGCAGGATGACGCCGCCGACCCGCGGCAGGCGACGCAGGTTGCGCAGAAGCT CGTCGACGACAAGGTCGTCGCGGTGGTCGGCCACCTGAACTCGGGCACGTCGATCCCGGCCTCGAAGATCTACAGCGACG CGGGCATCGTGCAGATCTCGCCGTCGGCGACCAACCCGGCGTACACGCAGCAAGGCTTCAAGACCACGTACCGCGTGGTG GCGACCGATGCGCAGCAGGGCCCGGCACTGGCGAACTACGCGCACTCGAAGGGCATCAAGAGCGTGGCGGTGGTCGACGA TTCGACCGCGTACGGCCAGGGTCTCGCGAACGAGTTCGAGAAGAAGGCGAAGGCGCTCGGCCTGAAGGTGATGTCGCATG ACGCGACGAACGACAAGGCGGTCGACTTCCGCGCGATTCTGACCAAGATCAAGGGCGAAAACCCGGACGCGATCATGTAC GGCGGCATGGACGCCACCGGCGGTCCGTTCGCGAAACAGGCGAAGCAGCTCGGCCTGCGCGCGAAGATCTTCGCGGGCGA CGGCGTGTGCACGGAAAAGCTGGCCGACCTGGCCGGCGACGCGACCGACAACATCGTGTGCTCGGAAGCCGGTGCTTCGC TCGAGAAGATGCCGGGCGGCAACGCGTTCAAGGCGAAGTACGAGAAGCGCTTCGGCCAGCCGATCCAGATCTATGCACCG TTCACGTATGACGCCGTGTACATCATCGCCGACGCGATGAAGCGCGCGAACTCGACGGACCCGGACAAGATCCTCGCGGC GATGCCGGCGACGAAGTACACGGGCGTGATCGGCACGACGACCTTCGACTCGAAGGGCGACCTGCAGCACGGCGTGATCT CGCTGTACAACTACAAGAGCGGCAAGAAGTCGCTGCTCGACGAAGTGAAGATGTAA
Upstream 100 bases:
>100_bases AAGCGGCTGTTTTCACGTGCTTGAGGCCAAGTGCATGAACGATGCAACCGGCGAATCGTCCAGTGATTGAAACACGGGGA TGGCAGCGGGGCACCGGGCG
Downstream 100 bases:
>100_bases CGCGACGCGCGATCGACAAGCGGTCGACAGGAGGGTGAAAGCGCGCATGCGGCAACGCATGCGCGCTTTCTTTTTGGGCC GGCGCGCGCGGCCGCGCCGT
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MAFFGTELETYMNIKMQKLLPITAAAMLCAAAASNASADQVVKIGHVAPLTGGIAHLGKDNENGARLAVEEINAKGLTIG GQKITLQLDPQDDAADPRQATQVAQKLVDDKVVAVVGHLNSGTSIPASKIYSDAGIVQISPSATNPAYTQQGFKTTYRVV ATDAQQGPALANYAHSKGIKSVAVVDDSTAYGQGLANEFEKKAKALGLKVMSHDATNDKAVDFRAILTKIKGENPDAIMY GGMDATGGPFAKQAKQLGLRAKIFAGDGVCTEKLADLAGDATDNIVCSEAGASLEKMPGGNAFKAKYEKRFGQPIQIYAP FTYDAVYIIADAMKRANSTDPDKILAAMPATKYTGVIGTTTFDSKGDLQHGVISLYNYKSGKKSLLDEVKM
Sequences:
>Translated_391_residues MAFFGTELETYMNIKMQKLLPITAAAMLCAAAASNASADQVVKIGHVAPLTGGIAHLGKDNENGARLAVEEINAKGLTIG GQKITLQLDPQDDAADPRQATQVAQKLVDDKVVAVVGHLNSGTSIPASKIYSDAGIVQISPSATNPAYTQQGFKTTYRVV ATDAQQGPALANYAHSKGIKSVAVVDDSTAYGQGLANEFEKKAKALGLKVMSHDATNDKAVDFRAILTKIKGENPDAIMY GGMDATGGPFAKQAKQLGLRAKIFAGDGVCTEKLADLAGDATDNIVCSEAGASLEKMPGGNAFKAKYEKRFGQPIQIYAP FTYDAVYIIADAMKRANSTDPDKILAAMPATKYTGVIGTTTFDSKGDLQHGVISLYNYKSGKKSLLDEVKM >Mature_390_residues AFFGTELETYMNIKMQKLLPITAAAMLCAAAASNASADQVVKIGHVAPLTGGIAHLGKDNENGARLAVEEINAKGLTIGG QKITLQLDPQDDAADPRQATQVAQKLVDDKVVAVVGHLNSGTSIPASKIYSDAGIVQISPSATNPAYTQQGFKTTYRVVA TDAQQGPALANYAHSKGIKSVAVVDDSTAYGQGLANEFEKKAKALGLKVMSHDATNDKAVDFRAILTKIKGENPDAIMYG GMDATGGPFAKQAKQLGLRAKIFAGDGVCTEKLADLAGDATDNIVCSEAGASLEKMPGGNAFKAKYEKRFGQPIQIYAPF TYDAVYIIADAMKRANSTDPDKILAAMPATKYTGVIGTTTFDSKGDLQHGVISLYNYKSGKKSLLDEVKM
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=366, Percent_Identity=32.7868852459016, Blast_Score=192, Evalue=4e-50, Organism=Escherichia coli, GI48994941, Length=374, Percent_Identity=32.620320855615, Blast_Score=175, Evalue=6e-45,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 41190; Mature: 41059
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFFGTELETYMNIKMQKLLPITAAAMLCAAAASNASADQVVKIGHVAPLTGGIAHLGKD CCEECCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCCHHHCCCC NENGARLAVEEINAKGLTIGGQKITLQLDPQDDAADPRQATQVAQKLVDDKVVAVVGHLN CCCCCEEEEEECCCCCEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECC SGTSIPASKIYSDAGIVQISPSATNPAYTQQGFKTTYRVVATDAQQGPALANYAHSKGIK CCCCCCHHHHHCCCCEEEECCCCCCCHHHHHCHHEEEEEEEECCCCCCHHHHHHHHCCCC SVAVVDDSTAYGQGLANEFEKKAKALGLKVMSHDATNDKAVDFRAILTKIKGENPDAIMY EEEEEECCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEE GGMDATGGPFAKQAKQLGLRAKIFAGDGVCTEKLADLAGDATDNIVCSEAGASLEKMPGG CCCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCEEECCCCCCHHHCCCC NAFKAKYEKRFGQPIQIYAPFTYDAVYIIADAMKRANSTDPDKILAAMPATKYTGVIGTT CHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCEEEEC TFDSKGDLQHGVISLYNYKSGKKSLLDEVKM CCCCCCCCCCCEEEEEECCCCHHHHHHHHCC >Mature Secondary Structure AFFGTELETYMNIKMQKLLPITAAAMLCAAAASNASADQVVKIGHVAPLTGGIAHLGKD CEECCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCCHHHCCCC NENGARLAVEEINAKGLTIGGQKITLQLDPQDDAADPRQATQVAQKLVDDKVVAVVGHLN CCCCCEEEEEECCCCCEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECC SGTSIPASKIYSDAGIVQISPSATNPAYTQQGFKTTYRVVATDAQQGPALANYAHSKGIK CCCCCCHHHHHCCCCEEEECCCCCCCHHHHHCHHEEEEEEEECCCCCCHHHHHHHHCCCC SVAVVDDSTAYGQGLANEFEKKAKALGLKVMSHDATNDKAVDFRAILTKIKGENPDAIMY EEEEEECCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEE GGMDATGGPFAKQAKQLGLRAKIFAGDGVCTEKLADLAGDATDNIVCSEAGASLEKMPGG CCCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCEEECCCCCCHHHCCCC NAFKAKYEKRFGQPIQIYAPFTYDAVYIIADAMKRANSTDPDKILAAMPATKYTGVIGTT CHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCEEEEC TFDSKGDLQHGVISLYNYKSGKKSLLDEVKM CCCCCCCCCCCEEEEEECCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA