| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688274
Identifier: 116688274
GI number: 116688274
Start: 289872
End: 290936
Strand: Reverse
Name: 116688274
Synonym: Bcen2424_0250
Alternate gene names: NA
Gene position: 290936-289872 (Counterclockwise)
Preceding gene: 116688299
Following gene: 116688272
Centisome position: 8.35
GC content: 67.7
Gene sequence:
>1065_bases ATGCGAATTGCCCAGATCGCGCCGCTGTACGAAGCCGTCCCGCCGAAACTCTACGGCGGCACCGAGCGTGTCGTGTCCTA CCTCACCGAGGCGCTCGTCGAACTCGGCCATGACGTGACGCTGTTCGCCAGCGGCGACTCCGTCACGTCGGCCCGTCTCG AGGCGGCGTGGCCGCGCGCGCTGCGGCTCGACCCGTCGGTCCGCGATTCGATGGCACCCCATATGCGGCTCCTCGAGCAG GTCGCCCGGGTCGCGCACGAATTCGACGTGCTGCACTTCCACCTCGACTACCTGCCGTTCCCGCTGATGTCGCGCCTCGA CACGCCGTACGTGACGACGCTGCACGGCCGCCTCGATCTGCCGGAGTTGCAGCCGGTGTTCGACGCGTTCCCGGATTCGC CGGTCGTGTCGATCTCGAACAACCAGCGCAAGCCGCTGCCGCAGGCCGCGTGGGCCGGCACCGTGTACCACGGGCTGCCC GACACGCTGCTCACGCCGCAGCCGGACGTGAAGCCTGAATACCTCGCGTTCCTCGGCCGGATCTGTCCCGAAAAGCGCGT CGACACCGCGATCCGCATCGCCGCGCAAAGCGGGCTGCCGCTGAAGATCGCGGCGAAGGTCGACAAGGCCGACGCCGACT ACTTCAAGGAAGTGATCGAGCCGCTGCTCGGCCAGGCGCACGTCGAATTCATCGGCGAGATCAACGAAGCGCAAAAGCCG GCGTTCCTGTCCGGCGCGAAGGCGTTGCTGTTCCCGATCGACTGGCCGGAGCCGTTCGGCCTGGTGATGATCGAGGCGAT GGCCTGCGGCACGCCGGTCGTCGCGTTCAACCGCGGCTCCGTGCCGGAAGTGATCGAGGACGGCGTGACCGGCTTCATCG TCGAGGACGTGCAGGGCGCGGTCGGCGCGCTGCACCGGATCGACAGCCTGTCGCGCACCGCGATCCGCGAGCGTTTCGAC ACGCGTTTCAGCTCGAAGGCAATGGCGCAGCGTTACGTCGAGACTTACGAATCGCTGTGCGCAGCAACCAAGCAACCGGC ATTGCGCCGGGTCGCGGGCGCCTGA
Upstream 100 bases:
>100_bases CGGCCACGTACCGCCAACCGCGTGCGTCGGCAAGTTCCGCAACCTTGTACGGGATCCGCCTCGGCGTCATCGCGCCCCGG ATCGACACAGGAGAACATCC
Downstream 100 bases:
>100_bases CGCGAAAATCCGCGCGGAAATAGGCCGTAAATCCGCGCCGAAATCGGCGCGCAAAACCCGCAAAGCAAAAGAGCCGCATC GTCGATGCGGCTCTTTCCAT
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: ORF7 [H]
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MRIAQIAPLYEAVPPKLYGGTERVVSYLTEALVELGHDVTLFASGDSVTSARLEAAWPRALRLDPSVRDSMAPHMRLLEQ VARVAHEFDVLHFHLDYLPFPLMSRLDTPYVTTLHGRLDLPELQPVFDAFPDSPVVSISNNQRKPLPQAAWAGTVYHGLP DTLLTPQPDVKPEYLAFLGRICPEKRVDTAIRIAAQSGLPLKIAAKVDKADADYFKEVIEPLLGQAHVEFIGEINEAQKP AFLSGAKALLFPIDWPEPFGLVMIEAMACGTPVVAFNRGSVPEVIEDGVTGFIVEDVQGAVGALHRIDSLSRTAIRERFD TRFSSKAMAQRYVETYESLCAATKQPALRRVAGA
Sequences:
>Translated_354_residues MRIAQIAPLYEAVPPKLYGGTERVVSYLTEALVELGHDVTLFASGDSVTSARLEAAWPRALRLDPSVRDSMAPHMRLLEQ VARVAHEFDVLHFHLDYLPFPLMSRLDTPYVTTLHGRLDLPELQPVFDAFPDSPVVSISNNQRKPLPQAAWAGTVYHGLP DTLLTPQPDVKPEYLAFLGRICPEKRVDTAIRIAAQSGLPLKIAAKVDKADADYFKEVIEPLLGQAHVEFIGEINEAQKP AFLSGAKALLFPIDWPEPFGLVMIEAMACGTPVVAFNRGSVPEVIEDGVTGFIVEDVQGAVGALHRIDSLSRTAIRERFD TRFSSKAMAQRYVETYESLCAATKQPALRRVAGA >Mature_354_residues MRIAQIAPLYEAVPPKLYGGTERVVSYLTEALVELGHDVTLFASGDSVTSARLEAAWPRALRLDPSVRDSMAPHMRLLEQ VARVAHEFDVLHFHLDYLPFPLMSRLDTPYVTTLHGRLDLPELQPVFDAFPDSPVVSISNNQRKPLPQAAWAGTVYHGLP DTLLTPQPDVKPEYLAFLGRICPEKRVDTAIRIAAQSGLPLKIAAKVDKADADYFKEVIEPLLGQAHVEFIGEINEAQKP AFLSGAKALLFPIDWPEPFGLVMIEAMACGTPVVAFNRGSVPEVIEDGVTGFIVEDVQGAVGALHRIDSLSRTAIRERFD TRFSSKAMAQRYVETYESLCAATKQPALRRVAGA
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 38949; Mature: 38949
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIAQIAPLYEAVPPKLYGGTERVVSYLTEALVELGHDVTLFASGDSVTSARLEAAWPRA CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCC LRLDPSVRDSMAPHMRLLEQVARVAHEFDVLHFHLDYLPFPLMSRLDTPYVTTLHGRLDL EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCCC PELQPVFDAFPDSPVVSISNNQRKPLPQAAWAGTVYHGLPDTLLTPQPDVKPEYLAFLGR CHHHHHHHCCCCCCEEEECCCCCCCCCHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHH ICPEKRVDTAIRIAAQSGLPLKIAAKVDKADADYFKEVIEPLLGQAHVEFIGEINEAQKP HCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AFLSGAKALLFPIDWPEPFGLVMIEAMACGTPVVAFNRGSVPEVIEDGVTGFIVEDVQGA HHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCEEHHHHHHHH VGALHRIDSLSRTAIRERFDTRFSSKAMAQRYVETYESLCAATKQPALRRVAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC >Mature Secondary Structure MRIAQIAPLYEAVPPKLYGGTERVVSYLTEALVELGHDVTLFASGDSVTSARLEAAWPRA CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCC LRLDPSVRDSMAPHMRLLEQVARVAHEFDVLHFHLDYLPFPLMSRLDTPYVTTLHGRLDL EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCCC PELQPVFDAFPDSPVVSISNNQRKPLPQAAWAGTVYHGLPDTLLTPQPDVKPEYLAFLGR CHHHHHHHCCCCCCEEEECCCCCCCCCHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHH ICPEKRVDTAIRIAAQSGLPLKIAAKVDKADADYFKEVIEPLLGQAHVEFIGEINEAQKP HCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AFLSGAKALLFPIDWPEPFGLVMIEAMACGTPVVAFNRGSVPEVIEDGVTGFIVEDVQGA HHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCEEHHHHHHHH VGALHRIDSLSRTAIRERFDTRFSSKAMAQRYVETYESLCAATKQPALRRVAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7896702 [H]