| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is aqpZ [H]
Identifier: 116688272
GI number: 116688272
Start: 288421
End: 289164
Strand: Reverse
Name: aqpZ [H]
Synonym: Bcen2424_0248
Alternate gene names: 116688272
Gene position: 289164-288421 (Counterclockwise)
Preceding gene: 116688274
Following gene: 116688269
Centisome position: 8.3
GC content: 68.01
Gene sequence:
>744_bases ATGAATCTTTCTCAGCGTCTCGCTGCAGAGGTATTCGGCACGTTCTGGCTGGTGCTCGGCGGGTGCGGAAGCGCCGTGCT GGCCGCCGCCTTTCCGGGCCTCGGCATCGGCTTTGCCGGCGTCGCACTCGCCTTCGGCCTGACCGTGCTGACGATGGCAT TCGCAATCGGCCACATCTCGGGTTGCCACCTGAATCCGGCGGTGAGCGTCGGCCTGACGGTCGCCGGCCGCTTCCCGGCA CGCGATCTCGCGCCGTACATCGTCGCGCAGGTCGTCGGCGCCACGCTCGGCGCCTTCGTGCTGTACCTGATCGCAACCGG CAAGCCGGGTTTCGACGTCGTCGGCAGCGGCTTTGCGACGAACGGCTTCGGCGATCGCTCGCCCGGCCACTACTCGCTCA CCGCGTCGTTCATCTGCGAAGTCGTGATGACGGGCTTCTTCCTGTTCGTGATCCTCGGCGCGACCGACAAGCGCGGGGTG CCGGCCGGCTTCGCGCCGATCGCGATCGGGCTGTGCCTGACGCTGATTCACCTGATCTCGATTCCGGTCACCAACACGTC GGTGAACCCGGCGCGCTCGACCGGCCCCGCGCTGTTCGTGGGCGGCGACGCGATCGGCCAGCTGTGGCTGTTCTGGGTCG CGCCGCTGATCGGCGCGGTACTCGCGGGGATCATCTACCCACTGGTCGCCGGGCGTGACGACGCCGTCGACCTGCTGCCG GCATCCGCTCGCACAAGCGAATAA
Upstream 100 bases:
>100_bases CGAACCCGATTCATTTCCTATAATCCAGACCAATTCCGGACGACGAAATAAATCCGTTGCGTCGGCCGGGGTCTTCAACC CACTTGGACGAGGTCCTTAC
Downstream 100 bases:
>100_bases AACACTACGGGGTCAAGCGAGCAGAGCAGCGAGCCTCACGCTGTCGAAGAACATCGAGGCAGGTAATTTCGACGGGCGCC CCTGGCGCCCGTTTTTCATT
Product: aquaporin Z
Products: H2O [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MNLSQRLAAEVFGTFWLVLGGCGSAVLAAAFPGLGIGFAGVALAFGLTVLTMAFAIGHISGCHLNPAVSVGLTVAGRFPA RDLAPYIVAQVVGATLGAFVLYLIATGKPGFDVVGSGFATNGFGDRSPGHYSLTASFICEVVMTGFFLFVILGATDKRGV PAGFAPIAIGLCLTLIHLISIPVTNTSVNPARSTGPALFVGGDAIGQLWLFWVAPLIGAVLAGIIYPLVAGRDDAVDLLP ASARTSE
Sequences:
>Translated_247_residues MNLSQRLAAEVFGTFWLVLGGCGSAVLAAAFPGLGIGFAGVALAFGLTVLTMAFAIGHISGCHLNPAVSVGLTVAGRFPA RDLAPYIVAQVVGATLGAFVLYLIATGKPGFDVVGSGFATNGFGDRSPGHYSLTASFICEVVMTGFFLFVILGATDKRGV PAGFAPIAIGLCLTLIHLISIPVTNTSVNPARSTGPALFVGGDAIGQLWLFWVAPLIGAVLAGIIYPLVAGRDDAVDLLP ASARTSE >Mature_247_residues MNLSQRLAAEVFGTFWLVLGGCGSAVLAAAFPGLGIGFAGVALAFGLTVLTMAFAIGHISGCHLNPAVSVGLTVAGRFPA RDLAPYIVAQVVGATLGAFVLYLIATGKPGFDVVGSGFATNGFGDRSPGHYSLTASFICEVVMTGFFLFVILGATDKRGV PAGFAPIAIGLCLTLIHLISIPVTNTSVNPARSTGPALFVGGDAIGQLWLFWVAPLIGAVLAGIIYPLVAGRDDAVDLLP ASARTSE
Specific function: Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response
COG id: COG0580
COG function: function code G; Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MIP/aquaporin (TC 1.A.8) family [H]
Homologues:
Organism=Homo sapiens, GI4755125, Length=190, Percent_Identity=38.4210526315789, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI4502181, Length=190, Percent_Identity=38.4210526315789, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI37694062, Length=190, Percent_Identity=36.8421052631579, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI4502183, Length=219, Percent_Identity=35.6164383561644, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI4502179, Length=227, Percent_Identity=34.3612334801762, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI6912506, Length=219, Percent_Identity=32.8767123287671, Blast_Score=91, Evalue=7e-19, Organism=Homo sapiens, GI157266307, Length=245, Percent_Identity=31.4285714285714, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI22538420, Length=271, Percent_Identity=30.6273062730627, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI4826645, Length=248, Percent_Identity=32.258064516129, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI86792455, Length=231, Percent_Identity=32.034632034632, Blast_Score=84, Evalue=9e-17, Organism=Homo sapiens, GI4502187, Length=242, Percent_Identity=30.1652892561983, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI45446752, Length=209, Percent_Identity=29.1866028708134, Blast_Score=68, Evalue=7e-12, Organism=Escherichia coli, GI1787101, Length=208, Percent_Identity=69.7115384615385, Blast_Score=282, Evalue=1e-77, Organism=Escherichia coli, GI1790362, Length=268, Percent_Identity=28.7313432835821, Blast_Score=82, Evalue=5e-17, Organism=Caenorhabditis elegans, GI71992966, Length=261, Percent_Identity=29.5019157088123, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71993722, Length=243, Percent_Identity=31.2757201646091, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17558372, Length=209, Percent_Identity=29.1866028708134, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI71992961, Length=260, Percent_Identity=28.8461538461538, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71994009, Length=238, Percent_Identity=28.1512605042017, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17531429, Length=252, Percent_Identity=30.5555555555556, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17531431, Length=252, Percent_Identity=30.5555555555556, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17544068, Length=259, Percent_Identity=29.3436293436293, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6321054, Length=201, Percent_Identity=27.8606965174129, Blast_Score=65, Evalue=9e-12, Organism=Drosophila melanogaster, GI24652747, Length=240, Percent_Identity=35.8333333333333, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI45551084, Length=240, Percent_Identity=35.8333333333333, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24652751, Length=234, Percent_Identity=32.0512820512821, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI19922038, Length=234, Percent_Identity=32.0512820512821, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24762342, Length=211, Percent_Identity=29.3838862559242, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI45550503, Length=245, Percent_Identity=26.530612244898, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24762344, Length=227, Percent_Identity=30.3964757709251, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24762346, Length=227, Percent_Identity=30.3964757709251, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24762348, Length=227, Percent_Identity=30.3964757709251, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI20130305, Length=227, Percent_Identity=30.3964757709251, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI17136672, Length=224, Percent_Identity=27.6785714285714, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012269 - InterPro: IPR000425 - InterPro: IPR022357 [H]
Pfam domain/function: PF00230 MIP [H]
EC number: NA
Molecular weight: Translated: 25122; Mature: 25122
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00221 MIP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSQRLAAEVFGTFWLVLGGCGSAVLAAAFPGLGIGFAGVALAFGLTVLTMAFAIGHIS CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC GCHLNPAVSVGLTVAGRFPARDLAPYIVAQVVGATLGAFVLYLIATGKPGFDVVGSGFAT CCCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCC NGFGDRSPGHYSLTASFICEVVMTGFFLFVILGATDKRGVPAGFAPIAIGLCLTLIHLIS CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH IPVTNTSVNPARSTGPALFVGGDAIGQLWLFWVAPLIGAVLAGIIYPLVAGRDDAVDLLP CCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCC ASARTSE CCCCCCC >Mature Secondary Structure MNLSQRLAAEVFGTFWLVLGGCGSAVLAAAFPGLGIGFAGVALAFGLTVLTMAFAIGHIS CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC GCHLNPAVSVGLTVAGRFPARDLAPYIVAQVVGATLGAFVLYLIATGKPGFDVVGSGFAT CCCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCC NGFGDRSPGHYSLTASFICEVVMTGFFLFVILGATDKRGVPAGFAPIAIGLCLTLIHLIS CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH IPVTNTSVNPARSTGPALFVGGDAIGQLWLFWVAPLIGAVLAGIIYPLVAGRDDAVDLLP CCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCC ASARTSE CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2O [Periplasm] [C]
Specific reaction: H2O [Periplasm] = H2O [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 14500782 [H]