Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688274

Identifier: 116688274

GI number: 116688274

Start: 289872

End: 290936

Strand: Reverse

Name: 116688274

Synonym: Bcen2424_0250

Alternate gene names: NA

Gene position: 290936-289872 (Counterclockwise)

Preceding gene: 116688299

Following gene: 116688272

Centisome position: 8.35

GC content: 67.7

Gene sequence:

>1065_bases
ATGCGAATTGCCCAGATCGCGCCGCTGTACGAAGCCGTCCCGCCGAAACTCTACGGCGGCACCGAGCGTGTCGTGTCCTA
CCTCACCGAGGCGCTCGTCGAACTCGGCCATGACGTGACGCTGTTCGCCAGCGGCGACTCCGTCACGTCGGCCCGTCTCG
AGGCGGCGTGGCCGCGCGCGCTGCGGCTCGACCCGTCGGTCCGCGATTCGATGGCACCCCATATGCGGCTCCTCGAGCAG
GTCGCCCGGGTCGCGCACGAATTCGACGTGCTGCACTTCCACCTCGACTACCTGCCGTTCCCGCTGATGTCGCGCCTCGA
CACGCCGTACGTGACGACGCTGCACGGCCGCCTCGATCTGCCGGAGTTGCAGCCGGTGTTCGACGCGTTCCCGGATTCGC
CGGTCGTGTCGATCTCGAACAACCAGCGCAAGCCGCTGCCGCAGGCCGCGTGGGCCGGCACCGTGTACCACGGGCTGCCC
GACACGCTGCTCACGCCGCAGCCGGACGTGAAGCCTGAATACCTCGCGTTCCTCGGCCGGATCTGTCCCGAAAAGCGCGT
CGACACCGCGATCCGCATCGCCGCGCAAAGCGGGCTGCCGCTGAAGATCGCGGCGAAGGTCGACAAGGCCGACGCCGACT
ACTTCAAGGAAGTGATCGAGCCGCTGCTCGGCCAGGCGCACGTCGAATTCATCGGCGAGATCAACGAAGCGCAAAAGCCG
GCGTTCCTGTCCGGCGCGAAGGCGTTGCTGTTCCCGATCGACTGGCCGGAGCCGTTCGGCCTGGTGATGATCGAGGCGAT
GGCCTGCGGCACGCCGGTCGTCGCGTTCAACCGCGGCTCCGTGCCGGAAGTGATCGAGGACGGCGTGACCGGCTTCATCG
TCGAGGACGTGCAGGGCGCGGTCGGCGCGCTGCACCGGATCGACAGCCTGTCGCGCACCGCGATCCGCGAGCGTTTCGAC
ACGCGTTTCAGCTCGAAGGCAATGGCGCAGCGTTACGTCGAGACTTACGAATCGCTGTGCGCAGCAACCAAGCAACCGGC
ATTGCGCCGGGTCGCGGGCGCCTGA

Upstream 100 bases:

>100_bases
CGGCCACGTACCGCCAACCGCGTGCGTCGGCAAGTTCCGCAACCTTGTACGGGATCCGCCTCGGCGTCATCGCGCCCCGG
ATCGACACAGGAGAACATCC

Downstream 100 bases:

>100_bases
CGCGAAAATCCGCGCGGAAATAGGCCGTAAATCCGCGCCGAAATCGGCGCGCAAAACCCGCAAAGCAAAAGAGCCGCATC
GTCGATGCGGCTCTTTCCAT

Product: glycosyl transferase, group 1

Products: NA

Alternate protein names: ORF7 [H]

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MRIAQIAPLYEAVPPKLYGGTERVVSYLTEALVELGHDVTLFASGDSVTSARLEAAWPRALRLDPSVRDSMAPHMRLLEQ
VARVAHEFDVLHFHLDYLPFPLMSRLDTPYVTTLHGRLDLPELQPVFDAFPDSPVVSISNNQRKPLPQAAWAGTVYHGLP
DTLLTPQPDVKPEYLAFLGRICPEKRVDTAIRIAAQSGLPLKIAAKVDKADADYFKEVIEPLLGQAHVEFIGEINEAQKP
AFLSGAKALLFPIDWPEPFGLVMIEAMACGTPVVAFNRGSVPEVIEDGVTGFIVEDVQGAVGALHRIDSLSRTAIRERFD
TRFSSKAMAQRYVETYESLCAATKQPALRRVAGA

Sequences:

>Translated_354_residues
MRIAQIAPLYEAVPPKLYGGTERVVSYLTEALVELGHDVTLFASGDSVTSARLEAAWPRALRLDPSVRDSMAPHMRLLEQ
VARVAHEFDVLHFHLDYLPFPLMSRLDTPYVTTLHGRLDLPELQPVFDAFPDSPVVSISNNQRKPLPQAAWAGTVYHGLP
DTLLTPQPDVKPEYLAFLGRICPEKRVDTAIRIAAQSGLPLKIAAKVDKADADYFKEVIEPLLGQAHVEFIGEINEAQKP
AFLSGAKALLFPIDWPEPFGLVMIEAMACGTPVVAFNRGSVPEVIEDGVTGFIVEDVQGAVGALHRIDSLSRTAIRERFD
TRFSSKAMAQRYVETYESLCAATKQPALRRVAGA
>Mature_354_residues
MRIAQIAPLYEAVPPKLYGGTERVVSYLTEALVELGHDVTLFASGDSVTSARLEAAWPRALRLDPSVRDSMAPHMRLLEQ
VARVAHEFDVLHFHLDYLPFPLMSRLDTPYVTTLHGRLDLPELQPVFDAFPDSPVVSISNNQRKPLPQAAWAGTVYHGLP
DTLLTPQPDVKPEYLAFLGRICPEKRVDTAIRIAAQSGLPLKIAAKVDKADADYFKEVIEPLLGQAHVEFIGEINEAQKP
AFLSGAKALLFPIDWPEPFGLVMIEAMACGTPVVAFNRGSVPEVIEDGVTGFIVEDVQGAVGALHRIDSLSRTAIRERFD
TRFSSKAMAQRYVETYESLCAATKQPALRRVAGA

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 38949; Mature: 38949

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAQIAPLYEAVPPKLYGGTERVVSYLTEALVELGHDVTLFASGDSVTSARLEAAWPRA
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCC
LRLDPSVRDSMAPHMRLLEQVARVAHEFDVLHFHLDYLPFPLMSRLDTPYVTTLHGRLDL
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCCC
PELQPVFDAFPDSPVVSISNNQRKPLPQAAWAGTVYHGLPDTLLTPQPDVKPEYLAFLGR
CHHHHHHHCCCCCCEEEECCCCCCCCCHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHH
ICPEKRVDTAIRIAAQSGLPLKIAAKVDKADADYFKEVIEPLLGQAHVEFIGEINEAQKP
HCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AFLSGAKALLFPIDWPEPFGLVMIEAMACGTPVVAFNRGSVPEVIEDGVTGFIVEDVQGA
HHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCEEHHHHHHHH
VGALHRIDSLSRTAIRERFDTRFSSKAMAQRYVETYESLCAATKQPALRRVAGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
>Mature Secondary Structure
MRIAQIAPLYEAVPPKLYGGTERVVSYLTEALVELGHDVTLFASGDSVTSARLEAAWPRA
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCC
LRLDPSVRDSMAPHMRLLEQVARVAHEFDVLHFHLDYLPFPLMSRLDTPYVTTLHGRLDL
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCCC
PELQPVFDAFPDSPVVSISNNQRKPLPQAAWAGTVYHGLPDTLLTPQPDVKPEYLAFLGR
CHHHHHHHCCCCCCEEEECCCCCCCCCHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHH
ICPEKRVDTAIRIAAQSGLPLKIAAKVDKADADYFKEVIEPLLGQAHVEFIGEINEAQKP
HCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AFLSGAKALLFPIDWPEPFGLVMIEAMACGTPVVAFNRGSVPEVIEDGVTGFIVEDVQGA
HHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCCEEHHHHHHHH
VGALHRIDSLSRTAIRERFDTRFSSKAMAQRYVETYESLCAATKQPALRRVAGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7896702 [H]