| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is 116688263
Identifier: 116688263
GI number: 116688263
Start: 277747
End: 278046
Strand: Reverse
Name: 116688263
Synonym: Bcen2424_0239
Alternate gene names: NA
Gene position: 278046-277747 (Counterclockwise)
Preceding gene: 116688264
Following gene: 116688262
Centisome position: 7.98
GC content: 69.0
Gene sequence:
>300_bases ATGGAACAGACCGAACTGATTGCGCAGATCGACGCGTTCACCGACGCCATCGAACACGCGGCCGCGATGGCCGACTGGGC CGAGGCCGTGCGCCTCGTCGATGCGCGCTGGTCGCTCGTCGCGCTGCTCTCGACCGACCAGCCGCCCGTCGGCATCGCCG CGATCCGCCGCATGCAGGCCAGCAACGACCGGATCTTCGCCGGCGCGCAGCGCGCGCAGCAGGAGCTGACCGACGAATAC CAGGCGGCAATGAGCCGCGTGCAGGCCGTCGGCCAGTACCAGAGCATCGCGAACCGTTAA
Upstream 100 bases:
>100_bases AGCAACTCGCAATACTTGACCCAGCTGTTCGGCGGCGCGAACAGCGGCGGCGCGCTGGCGAACAACAAGAGCTGACCGCT AGCCGGACAGGAGAGCCCAG
Downstream 100 bases:
>100_bases GACCCGCCGCGCGGCGTGCTCGACACGCATGCGCCGCCAACCCGACAACAAGAACTACGCGCTGATGTGAGGGCGTGCTC GTTCGCCTCCGTGCCCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MEQTELIAQIDAFTDAIEHAAAMADWAEAVRLVDARWSLVALLSTDQPPVGIAAIRRMQASNDRIFAGAQRAQQELTDEY QAAMSRVQAVGQYQSIANR
Sequences:
>Translated_99_residues MEQTELIAQIDAFTDAIEHAAAMADWAEAVRLVDARWSLVALLSTDQPPVGIAAIRRMQASNDRIFAGAQRAQQELTDEY QAAMSRVQAVGQYQSIANR >Mature_99_residues MEQTELIAQIDAFTDAIEHAAAMADWAEAVRLVDARWSLVALLSTDQPPVGIAAIRRMQASNDRIFAGAQRAQQELTDEY QAAMSRVQAVGQYQSIANR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10904; Mature: 10904
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQTELIAQIDAFTDAIEHAAAMADWAEAVRLVDARWSLVALLSTDQPPVGIAAIRRMQA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHC SNDRIFAGAQRAQQELTDEYQAAMSRVQAVGQYQSIANR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEQTELIAQIDAFTDAIEHAAAMADWAEAVRLVDARWSLVALLSTDQPPVGIAAIRRMQA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHC SNDRIFAGAQRAQQELTDEYQAAMSRVQAVGQYQSIANR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA