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The map label for this gene is fliD [H]

Identifier: 116688264

GI number: 116688264

Start: 278072

End: 279580

Strand: Reverse

Name: fliD [H]

Synonym: Bcen2424_0240

Alternate gene names: 116688264

Gene position: 279580-278072 (Counterclockwise)

Preceding gene: 116688265

Following gene: 116688263

Centisome position: 8.02

GC content: 66.67

Gene sequence:

>1509_bases
ATGTCGACGATCAATTCCGCCGTCACAGCCGCCAACAATTCGGCCAACAGCCAGCTGCAGCAGGCTGCCCAATCGATCAT
CAGCGGTTCGACCGGCAACTCGTCGATGGACGTCAACTCGCTCGTGACGGCACTCGTCAATGCGAAAACCGCCGGTCAGG
CCGCCGCGCTCAACGCGCAGCAAAGCAGCGACAACACCCAGATTTCCGCGTACGGCGCGCTGTCGGCCGCGCTGAGCGCA
CTGCAGGCCAGCCTCACGACGCTGTCGAACGGCTCGCTGCAGAACACCTTCACCGCGACCGCGAGCGGCACCGGCCTCAC
CGCGACCGCGGGCGCCGGCGCGGTGGCCGGCAGCTATTCGGTCGGCGTCACGCAGATCGCGACGTCGCAGTCGCTGTCGT
CGGCCGCGTTCGGTGCGTCGACCGCGCTCGGCACCGGCACGATGACGCTGTCGCTCGGCAGCCAGTCGTTCTCGGTCGAT
GTGAACGGCACCAACAACACGCTGTCCGGTATCGCCGCCGCGATCAACACCGCGACCGGCAACCCGGGCATCGTCGCGTC
GGTCGTCAACGGCAGCGACGGCGCGCACCTCGTGCTCAGCTCGACGCCGACCGGCGCGGCGAGCACGATCGGCGTCGCGC
TCAGCAACGTCGCCGGCGACAACGGCCTGTCCAGCCTCGGCGTCACGTCGACGGCCAGCACGACGGGCGGCCAGTCGACG
ATCACGTCCGCGAATAGCGGCGCAGCGTGGAAACAAAGCACCGCCGCGCAGGACGCCGCGTTCACGATCAACGGGATCGC
CGGCACCAGCGCGAGCAACACCGTGACGAGCGCGATCACCGGCGTCACGCTGAACCTGACCAGCGCCGCCGTCAGCGCCA
CGCAGCCGCAAACGTTGACGGTCGCGACCGACACGAAATCCCAGGCCGCCGCGATCAACAATTTCGCGACGCTCTATAAC
ACGCTCGTCACGACGATGGGCTCGCTGTCGAGCTTCACGTCCGGCGCGTCGTCGCAAGGCCCGCTGCTCGGCGACTCGAC
GCTGAACACGATCAAGAACGCACTCGCGTCGATCGTCGCGAGCGGCGTGACCAGCAACGGCTCGACGGTCAACCTCGCGT
CGATCGGCGTCACGCTGCAGGCCGACGGCACGCTGAAGGTCGACAGCACGGCGCTCAACGGCGCGCTGCAGAACAATCCG
ACGGGTGTCGCGTCGCTGTTCAACTCGACCAACGGGATCGGCGAGCAGTTGACGACGAACATCACGAACTACACGAAGAC
GAACGGACTGATCGCCGCGCGTACTACCGCGCTCAGCAACGATCTGAAGAACGTCGCCCAGCAGCAGACGACGCTGTCGA
ACTACGCAGCCCAGCTCACGAGCCAGTACCAGGCGCAGTTCACCGCGCTCAACACGCTGATGGCGACGATGAACAGCAAC
TCGCAATACTTGACCCAGCTGTTCGGCGGCGCGAACAGCGGCGGCGCGCTGGCGAACAACAAGAGCTGA

Upstream 100 bases:

>100_bases
ATGCGTGGCCCGGCCGCAGGCACTTGGCGCGCGGGGCATTGCCCCGCCGTCAGGTCTTCACCCAGAATTCCACGGATCAT
CCGCCGCACGGAGCACTACG

Downstream 100 bases:

>100_bases
CCGCTAGCCGGACAGGAGAGCCCAGATGGAACAGACCGAACTGATTGCGCAGATCGACGCGTTCACCGACGCCATCGAAC
ACGCGGCCGCGATGGCCGAC

Product: flagellar hook-associated 2 domain-containing protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 502; Mature: 501

Protein sequence:

>502_residues
MSTINSAVTAANNSANSQLQQAAQSIISGSTGNSSMDVNSLVTALVNAKTAGQAAALNAQQSSDNTQISAYGALSAALSA
LQASLTTLSNGSLQNTFTATASGTGLTATAGAGAVAGSYSVGVTQIATSQSLSSAAFGASTALGTGTMTLSLGSQSFSVD
VNGTNNTLSGIAAAINTATGNPGIVASVVNGSDGAHLVLSSTPTGAASTIGVALSNVAGDNGLSSLGVTSTASTTGGQST
ITSANSGAAWKQSTAAQDAAFTINGIAGTSASNTVTSAITGVTLNLTSAAVSATQPQTLTVATDTKSQAAAINNFATLYN
TLVTTMGSLSSFTSGASSQGPLLGDSTLNTIKNALASIVASGVTSNGSTVNLASIGVTLQADGTLKVDSTALNGALQNNP
TGVASLFNSTNGIGEQLTTNITNYTKTNGLIAARTTALSNDLKNVAQQQTTLSNYAAQLTSQYQAQFTALNTLMATMNSN
SQYLTQLFGGANSGGALANNKS

Sequences:

>Translated_502_residues
MSTINSAVTAANNSANSQLQQAAQSIISGSTGNSSMDVNSLVTALVNAKTAGQAAALNAQQSSDNTQISAYGALSAALSA
LQASLTTLSNGSLQNTFTATASGTGLTATAGAGAVAGSYSVGVTQIATSQSLSSAAFGASTALGTGTMTLSLGSQSFSVD
VNGTNNTLSGIAAAINTATGNPGIVASVVNGSDGAHLVLSSTPTGAASTIGVALSNVAGDNGLSSLGVTSTASTTGGQST
ITSANSGAAWKQSTAAQDAAFTINGIAGTSASNTVTSAITGVTLNLTSAAVSATQPQTLTVATDTKSQAAAINNFATLYN
TLVTTMGSLSSFTSGASSQGPLLGDSTLNTIKNALASIVASGVTSNGSTVNLASIGVTLQADGTLKVDSTALNGALQNNP
TGVASLFNSTNGIGEQLTTNITNYTKTNGLIAARTTALSNDLKNVAQQQTTLSNYAAQLTSQYQAQFTALNTLMATMNSN
SQYLTQLFGGANSGGALANNKS
>Mature_501_residues
STINSAVTAANNSANSQLQQAAQSIISGSTGNSSMDVNSLVTALVNAKTAGQAAALNAQQSSDNTQISAYGALSAALSAL
QASLTTLSNGSLQNTFTATASGTGLTATAGAGAVAGSYSVGVTQIATSQSLSSAAFGASTALGTGTMTLSLGSQSFSVDV
NGTNNTLSGIAAAINTATGNPGIVASVVNGSDGAHLVLSSTPTGAASTIGVALSNVAGDNGLSSLGVTSTASTTGGQSTI
TSANSGAAWKQSTAAQDAAFTINGIAGTSASNTVTSAITGVTLNLTSAAVSATQPQTLTVATDTKSQAAAINNFATLYNT
LVTTMGSLSSFTSGASSQGPLLGDSTLNTIKNALASIVASGVTSNGSTVNLASIGVTLQADGTLKVDSTALNGALQNNPT
GVASLFNSTNGIGEQLTTNITNYTKTNGLIAARTTALSNDLKNVAQQQTTLSNYAAQLTSQYQAQFTALNTLMATMNSNS
QYLTQLFGGANSGGALANNKS

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=477, Percent_Identity=33.9622641509434, Blast_Score=182, Evalue=5e-47,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 48983; Mature: 48852

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTINSAVTAANNSANSQLQQAAQSIISGSTGNSSMDVNSLVTALVNAKTAGQAAALNAQ
CCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCC
QSSDNTQISAYGALSAALSALQASLTTLSNGSLQNTFTATASGTGLTATAGAGAVAGSYS
CCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCC
VGVTQIATSQSLSSAAFGASTALGTGTMTLSLGSQSFSVDVNGTNNTLSGIAAAINTATG
CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCC
NPGIVASVVNGSDGAHLVLSSTPTGAASTIGVALSNVAGDNGLSSLGVTSTASTTGGQST
CCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCE
ITSANSGAAWKQSTAAQDAAFTINGIAGTSASNTVTSAITGVTLNLTSAAVSATQPQTLT
EECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCEEEEEHHHHHCCCCCCEEE
VATDTKSQAAAINNFATLYNTLVTTMGSLSSFTSGASSQGPLLGDSTLNTIKNALASIVA
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
SGVTSNGSTVNLASIGVTLQADGTLKVDSTALNGALQNNPTGVASLFNSTNGIGEQLTTN
HCCCCCCCEEEEEEEEEEEEECCEEEECCHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHC
ITNYTKTNGLIAARTTALSNDLKNVAQQQTTLSNYAAQLTSQYQAQFTALNTLMATMNSN
CCCEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SQYLTQLFGGANSGGALANNKS
HHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
STINSAVTAANNSANSQLQQAAQSIISGSTGNSSMDVNSLVTALVNAKTAGQAAALNAQ
CCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCC
QSSDNTQISAYGALSAALSALQASLTTLSNGSLQNTFTATASGTGLTATAGAGAVAGSYS
CCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCC
VGVTQIATSQSLSSAAFGASTALGTGTMTLSLGSQSFSVDVNGTNNTLSGIAAAINTATG
CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCC
NPGIVASVVNGSDGAHLVLSSTPTGAASTIGVALSNVAGDNGLSSLGVTSTASTTGGQST
CCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCE
ITSANSGAAWKQSTAAQDAAFTINGIAGTSASNTVTSAITGVTLNLTSAAVSATQPQTLT
EECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCEEEEEHHHHHCCCCCCEEE
VATDTKSQAAAINNFATLYNTLVTTMGSLSSFTSGASSQGPLLGDSTLNTIKNALASIVA
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
SGVTSNGSTVNLASIGVTLQADGTLKVDSTALNGALQNNPTGVASLFNSTNGIGEQLTTN
HCCCCCCCEEEEEEEEEEEEECCEEEECCHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHC
ITNYTKTNGLIAARTTALSNDLKNVAQQQTTLSNYAAQLTSQYQAQFTALNTLMATMNSN
CCCEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SQYLTQLFGGANSGGALANNKS
HHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10678962; 10984043 [H]